Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 AC160134.1-201ENSMUST00000213450 551 ntBASIC5.2□□□□□ -1.58
Col9a1Q05722 AC120540.2-201ENSMUST00000221716 387 ntBASIC5.2□□□□□ -1.58
Col9a1Q05722 Gm18441-201ENSMUST00000223539 617 ntBASIC5.2□□□□□ -1.58
Col9a1Q05722 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.2□□□□□ -1.58
Col9a1Q05722 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col9a1Q05722 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col9a1Q05722 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col9a1Q05722 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Col9a1Q05722 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col9a1Q05722 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.2□□□□□ -1.58
Col9a1Q05722 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col9a1Q05722 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col9a1Q05722 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col9a1Q05722 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col9a1Q05722 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm12449-201ENSMUST00000117572 234 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm13756-201ENSMUST00000117618 222 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm14874-201ENSMUST00000118995 438 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm11598-201ENSMUST00000119257 357 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm25543-201ENSMUST00000122678 312 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm14947-201ENSMUST00000133704 303 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm23279-201ENSMUST00000157912 97 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm23354-201ENSMUST00000158426 104 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm23182-201ENSMUST00000158688 135 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm42844-201ENSMUST00000200355 112 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm43424-201ENSMUST00000200484 253 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC5.19□□□□□ -1.58
Col9a1Q05722 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col9a1Q05722 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col9a1Q05722 Snora19-201ENSMUST00000082962 132 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm23658-201ENSMUST00000083233 132 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col9a1Q05722 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col9a1Q05722 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC5.19□□□□□ -1.58
Col9a1Q05722 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.19□□□□□ -1.58
Col9a1Q05722 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col9a1Q05722 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col9a1Q05722 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col9a1Q05722 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col9a1Q05722 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.18□□□□□ -1.58
Col9a1Q05722 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col9a1Q05722 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col9a1Q05722 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.18□□□□□ -1.58
Col9a1Q05722 Gm13801-201ENSMUST00000120750 160 ntBASIC5.18□□□□□ -1.58
Col9a1Q05722 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col9a1Q05722 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.18□□□□□ -1.58
Col9a1Q05722 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col9a1Q05722 Gm8274-201ENSMUST00000219820 463 ntBASIC5.18□□□□□ -1.58
Col9a1Q05722 Mir488-201ENSMUST00000093595 109 ntBASIC5.18□□□□□ -1.58
Col9a1Q05722 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.18□□□□□ -1.58
Col9a1Q05722 Gm2869-201ENSMUST00000124359 2621 ntBASIC5.18□□□□□ -1.58
Col9a1Q05722 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.18□□□□□ -1.58
Col9a1Q05722 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col9a1Q05722 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.18□□□□□ -1.58
Col9a1Q05722 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col9a1Q05722 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col9a1Q05722 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col9a1Q05722 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.18□□□□□ -1.58
Col9a1Q05722 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.18□□□□□ -1.58
Col9a1Q05722 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col9a1Q05722 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Col9a1Q05722 Gm12010-201ENSMUST00000122400 2017 ntBASIC5.18□□□□□ -1.58
Col9a1Q05722 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.18□□□□□ -1.58
Col9a1Q05722 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.17□□□□□ -1.58
Col9a1Q05722 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.17□□□□□ -1.58
Col9a1Q05722 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.17□□□□□ -1.58
Col9a1Q05722 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.17□□□□□ -1.58
Col9a1Q05722 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm22497-201ENSMUST00000104499 131 ntBASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm23492-201ENSMUST00000116837 115 ntBASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm25291-201ENSMUST00000122795 144 ntBASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm25267-201ENSMUST00000158522 63 ntBASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm43563-201ENSMUST00000196761 198 ntBASIC5.17□□□□□ -1.58
Col9a1Q05722 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC5.17□□□□□ -1.58
Col9a1Q05722 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm45543-201ENSMUST00000209327 88 ntBASIC5.17□□□□□ -1.58
Col9a1Q05722 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm22247-201ENSMUST00000082476 131 ntBASIC5.17□□□□□ -1.58
Col9a1Q05722 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms