Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm26446-201ENSMUST00000082455 103 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 n-R5s3-201ENSMUST00000083879 112 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 n-R5s152-201ENSMUST00000093641 119 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Col8a1Q00780 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Col8a1Q00780 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Col8a1Q00780 Gm8674-201ENSMUST00000179367 3047 ntBASIC3.75□□□□□ -1.81
Col8a1Q00780 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col8a1Q00780 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col8a1Q00780 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Col8a1Q00780 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.74□□□□□ -1.81
Col8a1Q00780 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col8a1Q00780 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col8a1Q00780 Mir541-201ENSMUST00000102097 90 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm22936-201ENSMUST00000103955 126 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm25833-201ENSMUST00000104137 133 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm11600-201ENSMUST00000119592 240 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm14687-201ENSMUST00000120206 363 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm14977-201ENSMUST00000121626 812 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm6969-201ENSMUST00000140065 342 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm23391-201ENSMUST00000157579 104 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm23112-201ENSMUST00000158606 125 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm25486-201ENSMUST00000158726 63 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm24085-201ENSMUST00000175172 116 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm25817-201ENSMUST00000177758 121 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm24862-201ENSMUST00000179103 79 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm23310-201ENSMUST00000179105 79 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm24766-201ENSMUST00000179182 121 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm25461-201ENSMUST00000179293 79 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm27421-201ENSMUST00000184729 167 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm37104-201ENSMUST00000193278 196 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm43925-201ENSMUST00000203498 206 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.74□□□□□ -1.81
Col8a1Q00780 AC113059.3-201ENSMUST00000217423 2777 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.74□□□□□ -1.81
Col8a1Q00780 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm8935-202ENSMUST00000105727 1959 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm38125-201ENSMUST00000194136 3438 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col8a1Q00780 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col8a1Q00780 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col8a1Q00780 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.74□□□□□ -1.81
Col8a1Q00780 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col8a1Q00780 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col8a1Q00780 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col8a1Q00780 Mir701-201ENSMUST00000102208 109 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Mir599-201ENSMUST00000102378 88 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm25560-201ENSMUST00000104606 176 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm15426-201ENSMUST00000117823 556 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm11490-201ENSMUST00000118128 272 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm13729-201ENSMUST00000120328 406 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm15223-201ENSMUST00000120989 826 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm24629-201ENSMUST00000122762 89 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm23000-201ENSMUST00000157083 139 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm22378-201ENSMUST00000157481 111 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm26354-201ENSMUST00000158221 129 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm25654-201ENSMUST00000158467 88 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm10075-201ENSMUST00000162030 545 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm6214-201ENSMUST00000178845 541 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm24520-201ENSMUST00000179510 110 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm32340-201ENSMUST00000192883 259 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm38076-201ENSMUST00000193889 450 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm44446-201ENSMUST00000204864 255 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 AC159252.1-201ENSMUST00000224450 553 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm23455-201ENSMUST00000083331 100 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm23741-201ENSMUST00000097237 171 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col8a1Q00780 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col8a1Q00780 Gm38269-201ENSMUST00000194549 3298 ntBASIC3.73□□□□□ -1.81
Col8a1Q00780 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col8a1Q00780 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col8a1Q00780 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col8a1Q00780 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col8a1Q00780 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm15745-201ENSMUST00000119807 115 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm22453-201ENSMUST00000122801 318 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm13901-201ENSMUST00000137252 468 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm22059-201ENSMUST00000157544 104 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm25066-201ENSMUST00000158145 123 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm16318-201ENSMUST00000162402 601 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col8a1Q00780 Mir6345-201ENSMUST00000184286 128 ntBASIC3.72□□□□□ -1.81
Col8a1Q00780 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms