Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm26473-201ENSMUST00000116763 127 ntBASIC2.36□□□□□ -2.03
Cux1P53564 Gm16100-201ENSMUST00000120489 231 ntBASIC2.36□□□□□ -2.03
Cux1P53564 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Cux1P53564 Gm37417-201ENSMUST00000195257 454 ntBASIC2.36□□□□□ -2.03
Cux1P53564 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.36□□□□□ -2.03
Cux1P53564 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Cux1P53564 Gm14771-201ENSMUST00000118249 203 ntBASIC2.35□□□□□ -2.03
Cux1P53564 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.35□□□□□ -2.03
Cux1P53564 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.35□□□□□ -2.03
Cux1P53564 Gm18354-201ENSMUST00000173515 1068 ntBASIC2.35□□□□□ -2.03
Cux1P53564 Mir3098-201ENSMUST00000175416 87 ntBASIC2.35□□□□□ -2.03
Cux1P53564 Gm38329-201ENSMUST00000193473 427 ntBASIC2.35□□□□□ -2.03
Cux1P53564 Gm43316-201ENSMUST00000197252 1295 ntBASIC2.35□□□□□ -2.03
Cux1P53564 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.35□□□□□ -2.03
Cux1P53564 Mir30d-201ENSMUST00000083503 82 ntBASIC2.35□□□□□ -2.03
Cux1P53564 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC2.34□□□□□ -2.03
Cux1P53564 Gm12386-201ENSMUST00000117380 688 ntBASIC2.34□□□□□ -2.03
Cux1P53564 Gm12512-201ENSMUST00000119620 217 ntBASIC2.34□□□□□ -2.03
Cux1P53564 Gm25341-201ENSMUST00000157461 268 ntBASIC2.34□□□□□ -2.03
Cux1P53564 Gm18406-201ENSMUST00000185872 669 ntBASIC2.34□□□□□ -2.03
Cux1P53564 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.34□□□□□ -2.03
Cux1P53564 Gm37684-201ENSMUST00000192779 355 ntBASIC2.34□□□□□ -2.03
Cux1P53564 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.34□□□□□ -2.03
Cux1P53564 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.34□□□□□ -2.03
Cux1P53564 Gm16976-205ENSMUST00000227324 226 ntBASIC2.34□□□□□ -2.03
Cux1P53564 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Cux1P53564 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Cux1P53564 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Cux1P53564 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Cux1P53564 Gm22225-201ENSMUST00000157358 278 ntBASIC2.33□□□□□ -2.04
Cux1P53564 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cux1P53564 AC122465.3-201ENSMUST00000221644 355 ntBASIC2.33□□□□□ -2.04
Cux1P53564 CT030166.1-201ENSMUST00000222654 357 ntBASIC2.33□□□□□ -2.04
Cux1P53564 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cux1P53564 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Cux1P53564 Gm20915-201ENSMUST00000191575 663 ntBASIC2.32□□□□□ -2.04
Cux1P53564 Gm38018-201ENSMUST00000195651 540 ntBASIC2.32□□□□□ -2.04
Cux1P53564 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.32□□□□□ -2.04
Cux1P53564 Gm45689-201ENSMUST00000210522 133 ntBASIC2.32□□□□□ -2.04
Cux1P53564 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.32□□□□□ -2.04
Cux1P53564 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cux1P53564 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.32□□□□□ -2.04
Cux1P53564 Gm12432-201ENSMUST00000119540 186 ntBASIC2.32□□□□□ -2.04
Cux1P53564 Gm9785-202ENSMUST00000144563 593 ntBASIC2.32□□□□□ -2.04
Cux1P53564 Gm24546-201ENSMUST00000158652 102 ntBASIC2.32□□□□□ -2.04
Cux1P53564 Mir7063-201ENSMUST00000184158 91 ntBASIC2.32□□□□□ -2.04
Cux1P53564 Gm44718-201ENSMUST00000206886 359 ntBASIC2.32□□□□□ -2.04
Cux1P53564 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.32□□□□□ -2.04
Cux1P53564 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cux1P53564 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Cux1P53564 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cux1P53564 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.31□□□□□ -2.04
Cux1P53564 Gm7123-201ENSMUST00000117647 213 ntBASIC2.31□□□□□ -2.04
Cux1P53564 CT025552.1-201ENSMUST00000224561 521 ntBASIC2.31□□□□□ -2.04
Cux1P53564 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.31□□□□□ -2.04
Cux1P53564 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cux1P53564 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Cux1P53564 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.3□□□□□ -2.04
Cux1P53564 Gm14163-201ENSMUST00000117342 217 ntBASIC2.3□□□□□ -2.04
Cux1P53564 Gm23122-201ENSMUST00000157645 103 ntBASIC2.3□□□□□ -2.04
Cux1P53564 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.3□□□□□ -2.04
Cux1P53564 Mir6240-201ENSMUST00000184281 117 ntBASIC2.3□□□□□ -2.04
Cux1P53564 Gm19280-201ENSMUST00000190191 205 ntBASIC2.3□□□□□ -2.04
Cux1P53564 Gm5731-201ENSMUST00000190969 481 ntBASIC2.3□□□□□ -2.04
Cux1P53564 Gm37119-201ENSMUST00000195691 389 ntBASIC2.3□□□□□ -2.04
Cux1P53564 Mir7217-201ENSMUST00000200304 62 ntBASIC2.3□□□□□ -2.04
Cux1P53564 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.3□□□□□ -2.04
Cux1P53564 Gm26126-201ENSMUST00000083188 164 ntBASIC2.3□□□□□ -2.04
Cux1P53564 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Cux1P53564 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.29□□□□□ -2.04
Cux1P53564 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Cux1P53564 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Cux1P53564 Gm12351-201ENSMUST00000118727 292 ntBASIC2.29□□□□□ -2.04
Cux1P53564 Gm14907-201ENSMUST00000121948 854 ntBASIC2.29□□□□□ -2.04
Cux1P53564 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.29□□□□□ -2.04
Cux1P53564 Gm22843-201ENSMUST00000157710 134 ntBASIC2.29□□□□□ -2.04
Cux1P53564 Gm26355-201ENSMUST00000158220 105 ntBASIC2.29□□□□□ -2.04
Cux1P53564 Gm22521-201ENSMUST00000158272 134 ntBASIC2.29□□□□□ -2.04
Cux1P53564 Gm22766-201ENSMUST00000158372 99 ntBASIC2.29□□□□□ -2.04
Cux1P53564 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Cux1P53564 Mir6394-201ENSMUST00000184738 99 ntBASIC2.29□□□□□ -2.04
Cux1P53564 Gm37817-201ENSMUST00000195276 434 ntBASIC2.29□□□□□ -2.04
Cux1P53564 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.29□□□□□ -2.04
Cux1P53564 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.29□□□□□ -2.04
Cux1P53564 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.29□□□□□ -2.04
Cux1P53564 Gm24611-201ENSMUST00000083272 107 ntBASIC2.29□□□□□ -2.04
Cux1P53564 Gm14841-201ENSMUST00000121067 758 ntBASIC2.28□□□□□ -2.04
Cux1P53564 Gm25339-201ENSMUST00000157458 232 ntBASIC2.28□□□□□ -2.04
Cux1P53564 Gm22516-201ENSMUST00000158266 124 ntBASIC2.28□□□□□ -2.04
Cux1P53564 Mir6985-201ENSMUST00000184641 61 ntBASIC2.28□□□□□ -2.04
Cux1P53564 Gm27477-201ENSMUST00000184649 143 ntBASIC2.28□□□□□ -2.04
Cux1P53564 Gm17946-201ENSMUST00000186856 538 ntBASIC2.28□□□□□ -2.04
Cux1P53564 Gm29553-201ENSMUST00000189692 279 ntBASIC2.28□□□□□ -2.04
Cux1P53564 Gm37281-201ENSMUST00000192412 439 ntBASIC2.28□□□□□ -2.04
Cux1P53564 Gm37523-201ENSMUST00000194901 412 ntBASIC2.28□□□□□ -2.04
Cux1P53564 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Cux1P53564 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.28□□□□□ -2.04
Cux1P53564 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.28□□□□□ -2.04
Cux1P53564 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
Cux1P53564 Gm13510-201ENSMUST00000118659 429 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms