Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.05□□□□□ -1.76
Shmt1P50431 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Shmt1P50431 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Shmt1P50431 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Shmt1P50431 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.04□□□□□ -1.76
Shmt1P50431 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Shmt1P50431 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Shmt1P50431 Gm11600-201ENSMUST00000119592 240 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm15106-201ENSMUST00000119691 821 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm22718-201ENSMUST00000122701 315 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm22792-201ENSMUST00000157225 133 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm22219-201ENSMUST00000157562 319 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm23753-201ENSMUST00000157575 149 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm24409-201ENSMUST00000157881 152 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm24537-201ENSMUST00000157950 102 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21842-201ENSMUST00000177552 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21626-201ENSMUST00000177791 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21562-201ENSMUST00000177888 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21539-201ENSMUST00000177925 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21599-201ENSMUST00000178249 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21914-201ENSMUST00000178452 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21723-201ENSMUST00000178692 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21916-201ENSMUST00000178771 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21801-201ENSMUST00000178865 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21633-201ENSMUST00000178941 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21821-201ENSMUST00000179646 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21588-201ENSMUST00000180074 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21780-201ENSMUST00000180128 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21572-201ENSMUST00000180134 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm21529-201ENSMUST00000180175 498 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.04□□□□□ -1.76
Shmt1P50431 Gm29370-202ENSMUST00000187476 499 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.04□□□□□ -1.76
Shmt1P50431 Gm37239-201ENSMUST00000193510 141 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm44336-201ENSMUST00000203696 468 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Shmt1P50431 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Shmt1P50431 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Shmt1P50431 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Shmt1P50431 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.04□□□□□ -1.76
Shmt1P50431 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Shmt1P50431 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Shmt1P50431 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Shmt1P50431 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Shmt1P50431 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Shmt1P50431 Gm24079-201ENSMUST00000104352 132 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm24403-201ENSMUST00000104616 130 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm2066-201ENSMUST00000118046 389 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm11936-201ENSMUST00000118323 160 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm13831-201ENSMUST00000118764 302 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC4.03□□□□□ -1.76
Shmt1P50431 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Shmt1P50431 Gm24577-201ENSMUST00000158580 63 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm3027-201ENSMUST00000167579 451 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm3104-201ENSMUST00000171004 473 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm20693-201ENSMUST00000177431 211 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Spin2g-201ENSMUST00000178425 687 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Shmt1P50431 Mir6385-201ENSMUST00000184295 105 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm29320-201ENSMUST00000185235 615 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm29179-202ENSMUST00000186138 615 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm29448-201ENSMUST00000186675 615 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm29314-201ENSMUST00000186800 615 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm28253-202ENSMUST00000187971 615 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm29169-201ENSMUST00000189835 615 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm18429-201ENSMUST00000198707 421 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.03□□□□□ -1.76
Shmt1P50431 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 AC154552.1-201ENSMUST00000222969 202 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 AC165092.3-201ENSMUST00000223602 282 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm10237-201ENSMUST00000078393 273 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm26447-201ENSMUST00000082448 129 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm24626-201ENSMUST00000082621 161 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm24045-201ENSMUST00000083113 98 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm381-201ENSMUST00000117443 2037 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Shmt1P50431 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Shmt1P50431 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Shmt1P50431 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Shmt1P50431 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.03□□□□□ -1.76
Shmt1P50431 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Shmt1P50431 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.03□□□□□ -1.77
Shmt1P50431 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Shmt1P50431 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Shmt1P50431 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Shmt1P50431 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Shmt1P50431 Gm25727-201ENSMUST00000104522 131 ntBASIC4.02□□□□□ -1.77
Shmt1P50431 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Shmt1P50431 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms