Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 AC158395.1-201ENSMUST00000227206 452 ntBASIC5.09□□□□□ -1.59
Rfx1P48377 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.09□□□□□ -1.59
Rfx1P48377 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Rfx1P48377 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Rfx1P48377 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
Rfx1P48377 Gm44435-201ENSMUST00000204379 4119 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rfx1P48377 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rfx1P48377 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rfx1P48377 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rfx1P48377 Gm23014-201ENSMUST00000104144 130 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Gm14296-202ENSMUST00000108931 750 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Gm15029-201ENSMUST00000119742 199 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 n-R5s216-201ENSMUST00000122755 112 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC5.08□□□□□ -1.6
Rfx1P48377 Gm16354-201ENSMUST00000155376 150 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Gm24858-201ENSMUST00000158058 323 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Gm19503-201ENSMUST00000187109 241 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Gm28924-201ENSMUST00000190012 241 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Gm20203-201ENSMUST00000192352 332 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Gm9379-201ENSMUST00000196790 646 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.08□□□□□ -1.6
Rfx1P48377 Gm43730-201ENSMUST00000199863 372 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rfx1P48377 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC5.08□□□□□ -1.6
Rfx1P48377 Gm44881-201ENSMUST00000205425 367 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Gm44844-201ENSMUST00000207242 336 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Gm45315-201ENSMUST00000209283 333 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC5.08□□□□□ -1.6
Rfx1P48377 AC126253.2-201ENSMUST00000226518 205 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.08□□□□□ -1.6
Rfx1P48377 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Rfx1P48377 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rfx1P48377 Gm43705-201ENSMUST00000195958 3717 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rfx1P48377 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Rfx1P48377 Gm22020-201ENSMUST00000104358 136 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Gm13343-201ENSMUST00000116474 105 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Gm11935-201ENSMUST00000118608 399 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Gm11398-201ENSMUST00000120330 320 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Gm11456-201ENSMUST00000121070 256 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC5.07□□□□□ -1.6
Rfx1P48377 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.07□□□□□ -1.6
Rfx1P48377 Gm26414-201ENSMUST00000157674 269 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.07□□□□□ -1.6
Rfx1P48377 Gm28755-201ENSMUST00000185773 199 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Gm2719-201ENSMUST00000191929 444 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.07□□□□□ -1.6
Rfx1P48377 Gm44259-201ENSMUST00000204996 298 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC5.07□□□□□ -1.6
Rfx1P48377 AC154576.2-202ENSMUST00000223916 688 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Gm23055-201ENSMUST00000082805 94 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Gm8074-201ENSMUST00000095071 252 ntBASIC5.07□□□□□ -1.6
Rfx1P48377 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.07□□□□□ -1.6
Rfx1P48377 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rfx1P48377 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Rfx1P48377 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Rfx1P48377 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rfx1P48377 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Rfx1P48377 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rfx1P48377 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Rfx1P48377 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Rfx1P48377 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Rfx1P48377 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Rfx1P48377 Gm22778-201ENSMUST00000104090 128 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 Gm24067-201ENSMUST00000104514 85 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 Gm15223-201ENSMUST00000120989 826 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 Gm13725-201ENSMUST00000122139 207 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC5.06□□□□□ -1.6
Rfx1P48377 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rfx1P48377 Gm26034-201ENSMUST00000158154 116 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 Gm27510-201ENSMUST00000158214 64 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 Gm23704-201ENSMUST00000158844 340 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 Gm17065-201ENSMUST00000165245 239 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.06□□□□□ -1.6
Rfx1P48377 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rfx1P48377 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 Gm8132-201ENSMUST00000204938 640 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC5.06□□□□□ -1.6
Rfx1P48377 AC160134.1-201ENSMUST00000213450 551 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 Supt4b-201ENSMUST00000214434 351 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 AC154271.1-201ENSMUST00000224780 383 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 CT009711.3-201ENSMUST00000225882 250 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Rfx1P48377 Rny1-201ENSMUST00000083767 112 ntBASIC5.06□□□□□ -1.6
Rfx1P48377 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
Rfx1P48377 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Rfx1P48377 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.06□□□□□ -1.6
Rfx1P48377 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Rfx1P48377 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Rfx1P48377 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Rfx1P48377 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Rfx1P48377 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Rfx1P48377 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC5.05□□□□□ -1.6
Rfx1P48377 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Rfx1P48377 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms