Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC1.45□□□□□ -2.18
HttP42859 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
HttP42859 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC1.45□□□□□ -2.18
HttP42859 Gm14815-201ENSMUST00000120060 488 ntBASIC1.45□□□□□ -2.18
HttP42859 Gm23893-201ENSMUST00000158106 134 ntBASIC1.45□□□□□ -2.18
HttP42859 Gm27248-201ENSMUST00000184004 166 ntBASIC1.45□□□□□ -2.18
HttP42859 Gm29263-201ENSMUST00000188718 463 ntBASIC1.45□□□□□ -2.18
HttP42859 Gm28384-201ENSMUST00000189079 463 ntBASIC1.45□□□□□ -2.18
HttP42859 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
HttP42859 Gm44830-201ENSMUST00000207667 584 ntBASIC1.45□□□□□ -2.18
HttP42859 Gm44666-201ENSMUST00000208544 391 ntBASIC1.45□□□□□ -2.18
HttP42859 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.45□□□□□ -2.18
HttP42859 Gm25375-201ENSMUST00000158157 135 ntBASIC1.44□□□□□ -2.18
HttP42859 Mir6371-201ENSMUST00000184470 111 ntBASIC1.44□□□□□ -2.18
HttP42859 Gm29192-201ENSMUST00000190942 377 ntBASIC1.44□□□□□ -2.18
HttP42859 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.44□□□□□ -2.18
HttP42859 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
HttP42859 Gm25495-201ENSMUST00000104431 131 ntBASIC1.44□□□□□ -2.18
HttP42859 Gm15933-201ENSMUST00000117215 616 ntBASIC1.44□□□□□ -2.18
HttP42859 Gm24942-201ENSMUST00000158328 114 ntBASIC1.44□□□□□ -2.18
HttP42859 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HttP42859 Gm29604-201ENSMUST00000187176 163 ntBASIC1.44□□□□□ -2.18
HttP42859 Gm28724-202ENSMUST00000194218 295 ntBASIC1.44□□□□□ -2.18
HttP42859 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.44□□□□□ -2.18
HttP42859 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
HttP42859 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.44□□□□□ -2.18
HttP42859 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
HttP42859 Gm22494-201ENSMUST00000104495 128 ntBASIC1.44□□□□□ -2.18
HttP42859 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
HttP42859 Mir6904-201ENSMUST00000183443 67 ntBASIC1.43□□□□□ -2.18
HttP42859 Gm29281-201ENSMUST00000188077 381 ntBASIC1.43□□□□□ -2.18
HttP42859 Gm45742-201ENSMUST00000212400 433 ntBASIC1.43□□□□□ -2.18
HttP42859 Gm24555-201ENSMUST00000104548 124 ntBASIC1.43□□□□□ -2.18
HttP42859 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC1.43□□□□□ -2.18
HttP42859 Gm13239-201ENSMUST00000119920 637 ntBASIC1.43□□□□□ -2.18
HttP42859 Gm14366-201ENSMUST00000121970 730 ntBASIC1.43□□□□□ -2.18
HttP42859 Gm25838-201ENSMUST00000158920 120 ntBASIC1.43□□□□□ -2.18
HttP42859 Gm17162-201ENSMUST00000168538 473 ntBASIC1.43□□□□□ -2.18
HttP42859 Gm5967-201ENSMUST00000172723 494 ntBASIC1.43□□□□□ -2.18
HttP42859 Gm25248-201ENSMUST00000175473 98 ntBASIC1.43□□□□□ -2.18
HttP42859 Gm37037-201ENSMUST00000194475 424 ntBASIC1.43□□□□□ -2.18
HttP42859 Gm20948-201ENSMUST00000211091 449 ntBASIC1.43□□□□□ -2.18
HttP42859 Gm23122-201ENSMUST00000157645 103 ntBASIC1.42□□□□□ -2.18
HttP42859 Gm25166-201ENSMUST00000158909 111 ntBASIC1.42□□□□□ -2.18
HttP42859 Gm5929-201ENSMUST00000166883 487 ntBASIC1.42□□□□□ -2.18
HttP42859 Gm21742-201ENSMUST00000189352 548 ntBASIC1.42□□□□□ -2.18
HttP42859 Gm43675-201ENSMUST00000199468 1184 ntBASIC1.42□□□□□ -2.18
HttP42859 Gm381-201ENSMUST00000117443 2037 ntBASIC1.42□□□□□ -2.18
HttP42859 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.42□□□□□ -2.18
HttP42859 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.42□□□□□ -2.18
HttP42859 Gm24061-201ENSMUST00000157489 120 ntBASIC1.42□□□□□ -2.18
HttP42859 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HttP42859 Gm18982-201ENSMUST00000198118 529 ntBASIC1.42□□□□□ -2.18
HttP42859 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.42□□□□□ -2.18
HttP42859 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.41□□□□□ -2.18
HttP42859 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.41□□□□□ -2.18
HttP42859 Gm24579-201ENSMUST00000103964 144 ntBASIC1.41□□□□□ -2.18
HttP42859 Gm13687-201ENSMUST00000119857 282 ntBASIC1.41□□□□□ -2.18
HttP42859 Gm23278-201ENSMUST00000157911 143 ntBASIC1.41□□□□□ -2.18
HttP42859 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HttP42859 Gm22254-201ENSMUST00000179186 110 ntBASIC1.41□□□□□ -2.18
HttP42859 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.41□□□□□ -2.18
HttP42859 AC123064.2-201ENSMUST00000217758 193 ntBASIC1.41□□□□□ -2.18
HttP42859 AC140254.1-201ENSMUST00000220063 331 ntBASIC1.41□□□□□ -2.18
HttP42859 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HttP42859 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
HttP42859 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC1.41□□□□□ -2.18
HttP42859 Gm15065-201ENSMUST00000121699 273 ntBASIC1.41□□□□□ -2.18
HttP42859 Gm6788-201ENSMUST00000166459 270 ntBASIC1.41□□□□□ -2.18
HttP42859 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HttP42859 Snord14d-201ENSMUST00000083424 86 ntBASIC1.41□□□□□ -2.18
HttP42859 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
HttP42859 Gm12393-201ENSMUST00000117084 848 ntBASIC1.4□□□□□ -2.18
HttP42859 Gm26348-201ENSMUST00000157528 240 ntBASIC1.4□□□□□ -2.18
HttP42859 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC1.4□□□□□ -2.18
HttP42859 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
HttP42859 Gm23063-201ENSMUST00000102350 93 ntBASIC1.4□□□□□ -2.19
HttP42859 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.4□□□□□ -2.19
HttP42859 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.4□□□□□ -2.19
HttP42859 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.4□□□□□ -2.19
HttP42859 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HttP42859 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HttP42859 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.4□□□□□ -2.19
HttP42859 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1.39□□□□□ -2.19
HttP42859 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
HttP42859 Gm43894-201ENSMUST00000203274 688 ntBASIC1.39□□□□□ -2.19
HttP42859 Gm11350-201ENSMUST00000121436 870 ntBASIC1.39□□□□□ -2.19
HttP42859 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.39□□□□□ -2.19
HttP42859 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.39□□□□□ -2.19
HttP42859 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
HttP42859 Gm11785-201ENSMUST00000120165 601 ntBASIC1.38□□□□□ -2.19
HttP42859 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.38□□□□□ -2.19
HttP42859 Gm22858-201ENSMUST00000174972 76 ntBASIC1.38□□□□□ -2.19
HttP42859 Gm28437-201ENSMUST00000190277 783 ntBASIC1.38□□□□□ -2.19
HttP42859 Gm45456-201ENSMUST00000210841 243 ntBASIC1.38□□□□□ -2.19
HttP42859 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.38□□□□□ -2.19
HttP42859 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
HttP42859 Gm38265-201ENSMUST00000193479 3766 ntBASIC1.38□□□□□ -2.19
HttP42859 Gm23705-201ENSMUST00000104370 130 ntBASIC1.38□□□□□ -2.19
HttP42859 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms