Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm25198-201ENSMUST00000178574 110 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Npn2-202ENSMUST00000189275 235 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Gm37438-201ENSMUST00000192813 393 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.53□□□□□ -2
Cxcl12P40224 Gm44727-201ENSMUST00000204225 451 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Gm44030-201ENSMUST00000204865 432 ntBASIC2.53□□□□□ -2
Cxcl12P40224 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.53□□□□□ -2
Cxcl12P40224 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.53□□□□□ -2
Cxcl12P40224 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.53□□□□□ -2
Cxcl12P40224 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cxcl12P40224 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.53□□□□□ -2
Cxcl12P40224 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.53□□□□□ -2.01
Cxcl12P40224 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cxcl12P40224 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cxcl12P40224 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm23472-201ENSMUST00000101806 191 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm11268-201ENSMUST00000118347 267 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm14358-201ENSMUST00000118458 403 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm6664-201ENSMUST00000119138 468 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm11693-201ENSMUST00000119625 565 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm15452-201ENSMUST00000119877 240 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm14008-201ENSMUST00000120483 274 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm16412-201ENSMUST00000121602 273 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm13406-201ENSMUST00000121991 256 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm23032-201ENSMUST00000157995 107 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm10177-202ENSMUST00000161698 207 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm24497-201ENSMUST00000177868 191 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm25939-201ENSMUST00000179876 191 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm7909-201ENSMUST00000182688 614 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm37817-201ENSMUST00000195276 434 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm44408-201ENSMUST00000200205 66 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm44274-201ENSMUST00000203417 256 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm45382-201ENSMUST00000210607 151 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm18892-201ENSMUST00000217628 881 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm23444-201ENSMUST00000082922 191 ntBASIC2.52□□□□□ -2.01
Cxcl12P40224 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cxcl12P40224 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cxcl12P40224 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
Cxcl12P40224 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.52□□□□□ -2.01
Cxcl12P40224 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cxcl12P40224 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm6913-201ENSMUST00000100019 348 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cxcl12P40224 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm13640-201ENSMUST00000118445 264 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm14669-201ENSMUST00000118841 250 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm11429-201ENSMUST00000119089 144 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm12607-201ENSMUST00000120724 493 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm14651-201ENSMUST00000147192 442 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm22561-201ENSMUST00000157331 84 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm22947-201ENSMUST00000158559 91 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC2.51□□□□□ -2.01
Cxcl12P40224 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm17154-201ENSMUST00000165748 431 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm23289-201ENSMUST00000175615 108 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.51□□□□□ -2.01
Cxcl12P40224 Mir6405-201ENSMUST00000184584 124 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC2.51□□□□□ -2.01
Cxcl12P40224 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Gm7214-201ENSMUST00000222428 272 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cxcl12P40224 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Cxcl12P40224 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.51□□□□□ -2.01
Cxcl12P40224 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cxcl12P40224 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cxcl12P40224 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cxcl12P40224 Gm26377-201ENSMUST00000102184 108 ntBASIC2.5□□□□□ -2.01
Cxcl12P40224 Gm12636-201ENSMUST00000117395 624 ntBASIC2.5□□□□□ -2.01
Cxcl12P40224 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Cxcl12P40224 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.5□□□□□ -2.01
Cxcl12P40224 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.5□□□□□ -2.01
Cxcl12P40224 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC2.5□□□□□ -2.01
Cxcl12P40224 Gm24212-201ENSMUST00000158258 132 ntBASIC2.5□□□□□ -2.01
Cxcl12P40224 Gm22766-201ENSMUST00000158372 99 ntBASIC2.5□□□□□ -2.01
Cxcl12P40224 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Cxcl12P40224 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Cxcl12P40224 Mir7225-201ENSMUST00000184178 54 ntBASIC2.5□□□□□ -2.01
Cxcl12P40224 Gm28412-201ENSMUST00000187243 177 ntBASIC2.5□□□□□ -2.01
Cxcl12P40224 Gm28956-201ENSMUST00000189047 427 ntBASIC2.5□□□□□ -2.01
Cxcl12P40224 Gm37576-201ENSMUST00000194228 372 ntBASIC2.5□□□□□ -2.01
Cxcl12P40224 Gm37709-201ENSMUST00000195074 600 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms