Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.43□□□□□ -1.86
Traf1P39428 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Traf1P39428 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Traf1P39428 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Traf1P39428 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Traf1P39428 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Traf1P39428 Mir190b-201ENSMUST00000104803 80 ntBASIC3.42□□□□□ -1.86
Traf1P39428 Gm14657-201ENSMUST00000117461 302 ntBASIC3.42□□□□□ -1.86
Traf1P39428 Gm12825-201ENSMUST00000120249 563 ntBASIC3.42□□□□□ -1.86
Traf1P39428 Gm15466-201ENSMUST00000122299 333 ntBASIC3.42□□□□□ -1.86
Traf1P39428 Gm7209-201ENSMUST00000122339 333 ntBASIC3.42□□□□□ -1.86
Traf1P39428 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.42□□□□□ -1.86
Traf1P39428 Gm25621-201ENSMUST00000157223 114 ntBASIC3.42□□□□□ -1.86
Traf1P39428 Gm25365-201ENSMUST00000158852 121 ntBASIC3.42□□□□□ -1.86
Traf1P39428 Gm24925-201ENSMUST00000178157 107 ntBASIC3.42□□□□□ -1.86
Traf1P39428 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Traf1P39428 Gm28534-201ENSMUST00000187744 676 ntBASIC3.42□□□□□ -1.86
Traf1P39428 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Traf1P39428 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.42□□□□□ -1.86
Traf1P39428 Gm44449-201ENSMUST00000203610 153 ntBASIC3.42□□□□□ -1.86
Traf1P39428 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.42□□□□□ -1.86
Traf1P39428 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.42□□□□□ -1.86
Traf1P39428 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Traf1P39428 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Traf1P39428 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Traf1P39428 Gm45872-201ENSMUST00000209804 1584 ntBASIC3.42□□□□□ -1.86
Traf1P39428 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Traf1P39428 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Traf1P39428 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Traf1P39428 Gm14971-201ENSMUST00000117980 663 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm16021-201ENSMUST00000121176 219 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm12639-201ENSMUST00000121400 493 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm11438-201ENSMUST00000121582 189 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm15986-201ENSMUST00000122153 400 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm22538-201ENSMUST00000158169 299 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm23268-201ENSMUST00000175494 78 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm23568-201ENSMUST00000177960 92 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm24829-201ENSMUST00000179245 92 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Mir6382-201ENSMUST00000184055 110 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm28926-201ENSMUST00000191063 680 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.41□□□□□ -1.86
Traf1P39428 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm44399-201ENSMUST00000205043 226 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm17991-201ENSMUST00000208139 297 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm46233-201ENSMUST00000217831 449 ntBASIC3.41□□□□□ -1.86
Traf1P39428 AC159297.2-201ENSMUST00000219567 1075 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Traf1P39428 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm25404-201ENSMUST00000082970 107 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Gm23650-201ENSMUST00000083355 70 ntBASIC3.41□□□□□ -1.86
Traf1P39428 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Traf1P39428 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Traf1P39428 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.4□□□□□ -1.86
Traf1P39428 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Traf1P39428 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
Traf1P39428 Gm2066-201ENSMUST00000118046 389 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm14428-201ENSMUST00000120408 822 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm13406-201ENSMUST00000121991 256 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm25294-201ENSMUST00000122791 104 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm26173-201ENSMUST00000158416 136 ntBASIC3.4□□□□□ -1.87
Traf1P39428 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Traf1P39428 Gm17187-201ENSMUST00000164622 410 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Traf1P39428 Mir3066-201ENSMUST00000175296 83 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm25451-201ENSMUST00000177832 121 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Traf1P39428 Mir8103-201ENSMUST00000183945 107 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Mir7081-201ENSMUST00000184490 75 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm28560-201ENSMUST00000186091 315 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm28334-201ENSMUST00000186653 315 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm28495-201ENSMUST00000188452 315 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm28232-201ENSMUST00000188683 315 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm28481-201ENSMUST00000189231 315 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm28358-202ENSMUST00000189292 223 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm29059-201ENSMUST00000191534 315 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm37765-201ENSMUST00000192395 315 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm37237-201ENSMUST00000192893 315 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm36968-201ENSMUST00000193737 315 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm38290-201ENSMUST00000195238 315 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC3.4□□□□□ -1.87
Traf1P39428 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.4□□□□□ -1.87
Traf1P39428 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.4□□□□□ -1.87
Traf1P39428 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.4□□□□□ -1.87
Traf1P39428 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Traf1P39428 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Mir184-201ENSMUST00000083662 69 ntBASIC3.4□□□□□ -1.87
Traf1P39428 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Traf1P39428 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Traf1P39428 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Traf1P39428 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Traf1P39428 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Traf1P39428 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Traf1P39428 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Traf1P39428 Gm23911-201ENSMUST00000104596 134 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Gm12814-201ENSMUST00000117091 846 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms