Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.9□□□□□ -1.78
LdlrP35951 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.9□□□□□ -1.78
LdlrP35951 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LdlrP35951 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LdlrP35951 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LdlrP35951 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LdlrP35951 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
LdlrP35951 Gm26273-201ENSMUST00000104180 131 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Gm2066-201ENSMUST00000118046 389 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC3.9□□□□□ -1.79
LdlrP35951 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LdlrP35951 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.9□□□□□ -1.79
LdlrP35951 Gm23098-201ENSMUST00000157552 299 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Gm24505-201ENSMUST00000157682 126 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Gm22336-201ENSMUST00000157719 107 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Gm24730-201ENSMUST00000158228 117 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Gm23198-201ENSMUST00000158811 91 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LdlrP35951 Gm23725-201ENSMUST00000177876 107 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LdlrP35951 Gm9830-201ENSMUST00000178509 357 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LdlrP35951 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
LdlrP35951 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.9□□□□□ -1.79
LdlrP35951 Gm27803-201ENSMUST00000183763 119 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.9□□□□□ -1.79
LdlrP35951 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Gm7468-201ENSMUST00000203900 652 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Gm44475-201ENSMUST00000204041 424 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Gm45119-201ENSMUST00000207612 199 ntBASIC3.9□□□□□ -1.79
LdlrP35951 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.9□□□□□ -1.79
LdlrP35951 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.9□□□□□ -1.79
LdlrP35951 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.9□□□□□ -1.79
LdlrP35951 AC154328.1-201ENSMUST00000225875 307 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LdlrP35951 Gm23451-201ENSMUST00000083328 122 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
LdlrP35951 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
LdlrP35951 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.9□□□□□ -1.79
LdlrP35951 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
LdlrP35951 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
LdlrP35951 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LdlrP35951 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LdlrP35951 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
LdlrP35951 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
LdlrP35951 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LdlrP35951 Gm381-201ENSMUST00000117443 2037 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Gm23941-201ENSMUST00000101953 107 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Mir667-201ENSMUST00000102441 92 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Gm15211-201ENSMUST00000118932 528 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.89□□□□□ -1.79
LdlrP35951 Gm3851-201ENSMUST00000168653 318 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Mir6715-201ENSMUST00000184990 57 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Gm28860-201ENSMUST00000188103 313 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Gm32033-201ENSMUST00000193483 339 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Gm42665-201ENSMUST00000202100 586 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Gm18602-201ENSMUST00000209794 851 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.89□□□□□ -1.79
LdlrP35951 Gm21937-201ENSMUST00000222825 218 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LdlrP35951 Gm26225-201ENSMUST00000082508 135 ntBASIC3.89□□□□□ -1.79
LdlrP35951 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.89□□□□□ -1.79
LdlrP35951 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.89□□□□□ -1.79
LdlrP35951 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LdlrP35951 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
LdlrP35951 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
LdlrP35951 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
LdlrP35951 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LdlrP35951 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LdlrP35951 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LdlrP35951 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
LdlrP35951 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LdlrP35951 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LdlrP35951 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LdlrP35951 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm4736-201ENSMUST00000100870 380 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
LdlrP35951 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
LdlrP35951 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
LdlrP35951 Gm15215-201ENSMUST00000117773 489 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm15844-201ENSMUST00000118016 576 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm13831-201ENSMUST00000118764 302 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm12156-201ENSMUST00000119188 554 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm14473-201ENSMUST00000122269 557 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm22059-201ENSMUST00000157544 104 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm24014-201ENSMUST00000157728 157 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm23499-201ENSMUST00000157736 268 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm23262-201ENSMUST00000158323 168 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm25643-201ENSMUST00000158874 103 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm8580-201ENSMUST00000160295 464 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm17159-201ENSMUST00000169043 482 ntBASIC3.88□□□□□ -1.79
LdlrP35951 Gm23864-201ENSMUST00000177607 107 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms