Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Msx1P13297 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Msx1P13297 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Msx1P13297 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Msx1P13297 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Msx1P13297 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Msx1P13297 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Msx1P13297 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Msx1P13297 Gm24234-201ENSMUST00000104316 107 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Gm13343-201ENSMUST00000116474 105 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Gm11971-201ENSMUST00000117715 288 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Gm5396-201ENSMUST00000121222 532 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Gm25805-201ENSMUST00000122788 108 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Gm22215-201ENSMUST00000157558 96 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Gm22804-201ENSMUST00000158052 101 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Gm22212-201ENSMUST00000158096 106 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Gm24636-201ENSMUST00000158673 288 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Gm19898-201ENSMUST00000177490 251 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.84□□□□□ -1.63
Msx1P13297 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Msx1P13297 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.84□□□□□ -1.63
Msx1P13297 AC100209.2-201ENSMUST00000224461 451 ntBASIC4.84□□□□□ -1.63
Msx1P13297 AC165415.1-201ENSMUST00000228924 273 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Msx1P13297 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Mir20a-201ENSMUST00000083508 107 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Msx1P13297 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Msx1P13297 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.84□□□□□ -1.63
Msx1P13297 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Msx1P13297 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Msx1P13297 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.84□□□□□ -1.64
Msx1P13297 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Msx1P13297 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Msx1P13297 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.84□□□□□ -1.64
Msx1P13297 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Msx1P13297 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.84□□□□□ -1.64
Msx1P13297 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Msx1P13297 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Msx1P13297 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Msx1P13297 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Msx1P13297 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
Msx1P13297 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Msx1P13297 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Msx1P13297 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Msx1P13297 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Msx1P13297 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Msx1P13297 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Msx1P13297 Gm12466-201ENSMUST00000121199 620 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.83□□□□□ -1.64
Msx1P13297 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.83□□□□□ -1.64
Msx1P13297 Gm25967-201ENSMUST00000157168 147 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm26153-201ENSMUST00000157433 127 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm24720-201ENSMUST00000157518 166 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm25846-201ENSMUST00000158013 135 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm25865-201ENSMUST00000158247 104 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm23196-201ENSMUST00000158806 107 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm5967-201ENSMUST00000172723 494 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Mir6410-201ENSMUST00000184204 104 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Mir6899-201ENSMUST00000184798 64 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm7182-201ENSMUST00000193351 732 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm43649-201ENSMUST00000196596 391 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.83□□□□□ -1.64
Msx1P13297 Gm19244-201ENSMUST00000204340 253 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm24966-201ENSMUST00000082443 79 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm23796-201ENSMUST00000084011 160 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Msx1P13297 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Msx1P13297 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Msx1P13297 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.83□□□□□ -1.64
Msx1P13297 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Gm37296-201ENSMUST00000192728 2922 ntBASIC4.83□□□□□ -1.64
Msx1P13297 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Msx1P13297 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Msx1P13297 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.82□□□□□ -1.64
Msx1P13297 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.82□□□□□ -1.64
Msx1P13297 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Msx1P13297 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Msx1P13297 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Msx1P13297 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.82□□□□□ -1.64
Msx1P13297 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Msx1P13297 Gm22899-201ENSMUST00000104540 131 ntBASIC4.82□□□□□ -1.64
Msx1P13297 Gm25427-201ENSMUST00000157605 103 ntBASIC4.82□□□□□ -1.64
Msx1P13297 Gm23781-201ENSMUST00000157940 308 ntBASIC4.82□□□□□ -1.64
Msx1P13297 Gm24666-201ENSMUST00000158937 167 ntBASIC4.82□□□□□ -1.64
Msx1P13297 Gm26157-201ENSMUST00000158974 126 ntBASIC4.82□□□□□ -1.64
Msx1P13297 Gm18177-201ENSMUST00000188373 404 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms