Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm25481-201ENSMUST00000083221 158 ntBASIC3.84□□□□□ -1.79
Best1O88870 Gm25578-201ENSMUST00000083406 104 ntBASIC3.84□□□□□ -1.79
Best1O88870 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.84□□□□□ -1.79
Best1O88870 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.84□□□□□ -1.79
Best1O88870 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
Best1O88870 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
Best1O88870 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.84□□□□□ -1.8
Best1O88870 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Best1O88870 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Best1O88870 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Best1O88870 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Best1O88870 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Best1O88870 Gm5937-201ENSMUST00000119715 643 ntBASIC3.83□□□□□ -1.8
Best1O88870 Gm14877-201ENSMUST00000119803 478 ntBASIC3.83□□□□□ -1.8
Best1O88870 Gm11403-201ENSMUST00000122195 369 ntBASIC3.83□□□□□ -1.8
Best1O88870 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.83□□□□□ -1.8
Best1O88870 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.83□□□□□ -1.8
Best1O88870 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.83□□□□□ -1.8
Best1O88870 Gm22080-201ENSMUST00000157591 106 ntBASIC3.83□□□□□ -1.8
Best1O88870 Gm24675-201ENSMUST00000158757 259 ntBASIC3.83□□□□□ -1.8
Best1O88870 Gm10075-201ENSMUST00000162030 545 ntBASIC3.83□□□□□ -1.8
Best1O88870 Gm24810-201ENSMUST00000175317 70 ntBASIC3.83□□□□□ -1.8
Best1O88870 Gm6625-201ENSMUST00000177870 272 ntBASIC3.83□□□□□ -1.8
Best1O88870 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Best1O88870 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.83□□□□□ -1.8
Best1O88870 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.83□□□□□ -1.8
Best1O88870 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.83□□□□□ -1.8
Best1O88870 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.83□□□□□ -1.8
Best1O88870 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.83□□□□□ -1.8
Best1O88870 Gm43578-201ENSMUST00000201250 459 ntBASIC3.83□□□□□ -1.8
Best1O88870 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.83□□□□□ -1.8
Best1O88870 Gm8745-201ENSMUST00000207846 782 ntBASIC3.83□□□□□ -1.8
Best1O88870 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.83□□□□□ -1.8
Best1O88870 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Best1O88870 AC104832.1-201ENSMUST00000222938 550 ntBASIC3.83□□□□□ -1.8
Best1O88870 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.83□□□□□ -1.8
Best1O88870 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.83□□□□□ -1.8
Best1O88870 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Best1O88870 Gm25856-201ENSMUST00000082786 75 ntBASIC3.83□□□□□ -1.8
Best1O88870 Mir30e-201ENSMUST00000083475 92 ntBASIC3.83□□□□□ -1.8
Best1O88870 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
Best1O88870 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Best1O88870 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Best1O88870 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
Best1O88870 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Best1O88870 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC3.82□□□□□ -1.8
Best1O88870 Gm26396-201ENSMUST00000104093 132 ntBASIC3.82□□□□□ -1.8
Best1O88870 Gm26273-201ENSMUST00000104180 131 ntBASIC3.82□□□□□ -1.8
Best1O88870 Gm14593-201ENSMUST00000119948 294 ntBASIC3.82□□□□□ -1.8
Best1O88870 Gm11448-201ENSMUST00000120427 450 ntBASIC3.82□□□□□ -1.8
Best1O88870 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.82□□□□□ -1.8
Best1O88870 Gm22560-201ENSMUST00000157332 120 ntBASIC3.82□□□□□ -1.8
Best1O88870 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Best1O88870 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Best1O88870 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.82□□□□□ -1.8
Best1O88870 Gm44149-201ENSMUST00000204256 226 ntBASIC3.82□□□□□ -1.8
Best1O88870 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.82□□□□□ -1.8
Best1O88870 AC126554.1-201ENSMUST00000222161 271 ntBASIC3.82□□□□□ -1.8
Best1O88870 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.82□□□□□ -1.8
Best1O88870 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Best1O88870 Gm22247-201ENSMUST00000082476 131 ntBASIC3.82□□□□□ -1.8
Best1O88870 Mir132-201ENSMUST00000083603 66 ntBASIC3.82□□□□□ -1.8
Best1O88870 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Best1O88870 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Best1O88870 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Best1O88870 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.81□□□□□ -1.8
Best1O88870 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Best1O88870 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Best1O88870 Gm15212-201ENSMUST00000122403 466 ntBASIC3.81□□□□□ -1.8
Best1O88870 Gm24014-201ENSMUST00000157728 157 ntBASIC3.81□□□□□ -1.8
Best1O88870 Gm22889-201ENSMUST00000158639 58 ntBASIC3.81□□□□□ -1.8
Best1O88870 Gm22891-201ENSMUST00000158641 164 ntBASIC3.81□□□□□ -1.8
Best1O88870 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.81□□□□□ -1.8
Best1O88870 Gm29408-201ENSMUST00000187536 216 ntBASIC3.81□□□□□ -1.8
Best1O88870 Gm28779-201ENSMUST00000189678 323 ntBASIC3.81□□□□□ -1.8
Best1O88870 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.81□□□□□ -1.8
Best1O88870 Gm4248-201ENSMUST00000196905 316 ntBASIC3.81□□□□□ -1.8
Best1O88870 Gm43529-201ENSMUST00000199178 412 ntBASIC3.81□□□□□ -1.8
Best1O88870 Gm44336-201ENSMUST00000203696 468 ntBASIC3.81□□□□□ -1.8
Best1O88870 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.81□□□□□ -1.8
Best1O88870 Gm45317-201ENSMUST00000210385 223 ntBASIC3.81□□□□□ -1.8
Best1O88870 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC3.81□□□□□ -1.8
Best1O88870 Mir137-201ENSMUST00000083635 73 ntBASIC3.81□□□□□ -1.8
Best1O88870 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Best1O88870 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Best1O88870 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Best1O88870 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Best1O88870 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Best1O88870 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
Best1O88870 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.8□□□□□ -1.8
Best1O88870 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.8□□□□□ -1.8
Best1O88870 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Best1O88870 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.8□□□□□ -1.8
Best1O88870 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.8□□□□□ -1.8
Best1O88870 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Best1O88870 Gm23322-201ENSMUST00000104464 167 ntBASIC3.8□□□□□ -1.8
Best1O88870 Gm22488-201ENSMUST00000116811 127 ntBASIC3.8□□□□□ -1.8
Best1O88870 Gm13806-201ENSMUST00000117822 325 ntBASIC3.8□□□□□ -1.8
Best1O88870 Gm15994-201ENSMUST00000118029 402 ntBASIC3.8□□□□□ -1.8
Best1O88870 Gm15364-201ENSMUST00000119618 585 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms