Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
Cbx4O55187 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cbx4O55187 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cbx4O55187 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cbx4O55187 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cbx4O55187 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Cbx4O55187 Gm12149-201ENSMUST00000117511 654 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm14868-201ENSMUST00000117840 216 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm13167-201ENSMUST00000118554 578 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm5287-201ENSMUST00000120666 598 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm13511-201ENSMUST00000121167 363 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm22792-201ENSMUST00000157225 133 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm22561-201ENSMUST00000157331 84 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm25909-201ENSMUST00000157619 121 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm24534-201ENSMUST00000157949 291 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm24853-201ENSMUST00000158026 121 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm25860-201ENSMUST00000158252 126 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm22136-201ENSMUST00000158751 268 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Cbx4O55187 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Cbx4O55187 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.37□□□□□ -1.87
Cbx4O55187 Gm29335-201ENSMUST00000188361 459 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm44391-201ENSMUST00000198490 93 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.37□□□□□ -1.87
Cbx4O55187 AC104832.1-201ENSMUST00000222938 550 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 AL590614.1-201ENSMUST00000226037 268 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cbx4O55187 Gm24037-201ENSMUST00000082871 180 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cbx4O55187 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.37□□□□□ -1.87
Cbx4O55187 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cbx4O55187 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cbx4O55187 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cbx4O55187 Gm24987-201ENSMUST00000104453 134 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm23532-201ENSMUST00000104569 112 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Mir294-201ENSMUST00000104710 84 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cbx4O55187 Gm14811-201ENSMUST00000117070 117 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm14537-201ENSMUST00000117464 599 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm12787-201ENSMUST00000119234 396 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm14574-201ENSMUST00000120644 279 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.36□□□□□ -1.87
Cbx4O55187 Gm12858-201ENSMUST00000121913 208 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.36□□□□□ -1.87
Cbx4O55187 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cbx4O55187 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.36□□□□□ -1.87
Cbx4O55187 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cbx4O55187 Gm25572-201ENSMUST00000157527 172 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm24240-201ENSMUST00000157785 135 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm23068-201ENSMUST00000158239 293 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cbx4O55187 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm27385-201ENSMUST00000184747 104 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC3.36□□□□□ -1.87
Cbx4O55187 Gm43083-201ENSMUST00000199594 476 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm45402-201ENSMUST00000211796 223 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 AC154296.2-201ENSMUST00000214696 545 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.36□□□□□ -1.87
Cbx4O55187 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm46193-201ENSMUST00000219399 364 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cbx4O55187 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm22364-201ENSMUST00000083097 98 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm26263-201ENSMUST00000083281 164 ntBASIC3.36□□□□□ -1.87
Cbx4O55187 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cbx4O55187 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cbx4O55187 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cbx4O55187 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cbx4O55187 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cbx4O55187 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cbx4O55187 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cbx4O55187 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.35□□□□□ -1.87
Cbx4O55187 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Cbx4O55187 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Cbx4O55187 Gm26396-201ENSMUST00000104093 132 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm14657-201ENSMUST00000117461 302 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm11386-201ENSMUST00000117761 347 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm2066-201ENSMUST00000118046 389 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm13314-201ENSMUST00000118742 335 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm11849-201ENSMUST00000121293 261 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm23887-201ENSMUST00000122683 172 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm27592-201ENSMUST00000157729 126 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Mir1934-201ENSMUST00000158127 83 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cbx4O55187 Gm22174-201ENSMUST00000175050 125 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm22692-201ENSMUST00000175055 125 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm27634-201ENSMUST00000175060 126 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm22460-201ENSMUST00000175269 124 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm26141-201ENSMUST00000175299 126 ntBASIC3.35□□□□□ -1.87
Cbx4O55187 Gm25535-201ENSMUST00000175364 125 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms