Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm8023-201ENSMUST00000195298 903 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm43043-201ENSMUST00000196579 412 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm43217-201ENSMUST00000199513 367 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm42828-201ENSMUST00000199669 469 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.71□□□□□ -2.14
Hmgb3O54879 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC1.71□□□□□ -2.14
Hmgb3O54879 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Hmgb3O54879 Gm25402-201ENSMUST00000082966 131 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Mir137-201ENSMUST00000083635 73 ntBASIC1.71□□□□□ -2.14
Hmgb3O54879 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Hmgb3O54879 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Hmgb3O54879 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Hmgb3O54879 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm23472-201ENSMUST00000101806 191 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm25090-201ENSMUST00000104000 132 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm15113-201ENSMUST00000119280 836 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm15120-201ENSMUST00000120602 301 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm23668-201ENSMUST00000157465 111 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm25460-201ENSMUST00000157954 127 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm24002-201ENSMUST00000158456 104 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm23704-201ENSMUST00000158844 340 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Hmgb3O54879 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Mir5112-201ENSMUST00000174897 60 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm24497-201ENSMUST00000177868 191 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm25939-201ENSMUST00000179876 191 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Mir7013-201ENSMUST00000183540 72 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm27522-201ENSMUST00000183949 230 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.7□□□□□ -2.14
Hmgb3O54879 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.7□□□□□ -2.14
Hmgb3O54879 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm37104-201ENSMUST00000193278 196 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm44300-201ENSMUST00000196792 121 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC1.7□□□□□ -2.14
Hmgb3O54879 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC1.7□□□□□ -2.14
Hmgb3O54879 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Hmgb3O54879 AC073947.3-201ENSMUST00000215576 766 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm23444-201ENSMUST00000082922 191 ntBASIC1.7□□□□□ -2.14
Hmgb3O54879 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm13876-201ENSMUST00000118451 261 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm12235-201ENSMUST00000118596 170 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm12934-201ENSMUST00000119221 343 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm16021-201ENSMUST00000121176 219 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm11438-201ENSMUST00000121582 189 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm15530-201ENSMUST00000122206 555 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm22037-201ENSMUST00000157280 296 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm22534-201ENSMUST00000158173 104 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm20673-201ENSMUST00000177167 430 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm20660-201ENSMUST00000177515 289 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Hmgb3O54879 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm3724-201ENSMUST00000197957 349 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Hmgb3O54879 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.69□□□□□ -2.14
Hmgb3O54879 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Hmgb3O54879 AC158622.1-201ENSMUST00000217107 230 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Hmgb3O54879 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.69□□□□□ -2.14
Hmgb3O54879 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Hmgb3O54879 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Hmgb3O54879 Mir208a-201ENSMUST00000083498 83 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Mir323-201ENSMUST00000083683 86 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
Hmgb3O54879 AC115891.1-201ENSMUST00000215798 1755 ntBASIC1.69□□□□□ -2.14
Hmgb3O54879 Gm7648-201ENSMUST00000173036 1658 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm22494-201ENSMUST00000104495 128 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm14670-201ENSMUST00000117327 337 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm13731-201ENSMUST00000117332 196 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm22960-201ENSMUST00000122517 104 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm24911-201ENSMUST00000157292 136 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm23865-201ENSMUST00000157723 97 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm25368-201ENSMUST00000158847 131 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Mir6950-201ENSMUST00000184438 73 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm27753-201ENSMUST00000184742 203 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm43284-201ENSMUST00000200103 253 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Mir497-201ENSMUST00000200557 84 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm44058-201ENSMUST00000204335 467 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm29920-201ENSMUST00000206876 754 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 Gm45614-201ENSMUST00000209994 721 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.68□□□□□ -2.14
Hmgb3O54879 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 161.9 ms