Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm38041-201ENSMUST00000194445 661 ntBASIC1.93□□□□□ -2.1
Sdc4O35988 Gm18551-201ENSMUST00000195594 642 ntBASIC1.93□□□□□ -2.1
Sdc4O35988 Gm43541-201ENSMUST00000197208 581 ntBASIC1.93□□□□□ -2.1
Sdc4O35988 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.93□□□□□ -2.1
Sdc4O35988 Gm45296-201ENSMUST00000209625 205 ntBASIC1.93□□□□□ -2.1
Sdc4O35988 Mir325-201ENSMUST00000083491 98 ntBASIC1.93□□□□□ -2.1
Sdc4O35988 Gm22353-201ENSMUST00000083918 136 ntBASIC1.93□□□□□ -2.1
Sdc4O35988 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Sdc4O35988 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Sdc4O35988 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Sdc4O35988 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Sdc4O35988 Gm11438-201ENSMUST00000121582 189 ntBASIC1.92□□□□□ -2.1
Sdc4O35988 Gm11344-201ENSMUST00000122011 335 ntBASIC1.92□□□□□ -2.1
Sdc4O35988 Gm16373-201ENSMUST00000129517 303 ntBASIC1.92□□□□□ -2.1
Sdc4O35988 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.92□□□□□ -2.1
Sdc4O35988 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Sdc4O35988 Mir3473a-201ENSMUST00000175011 78 ntBASIC1.92□□□□□ -2.1
Sdc4O35988 Mir6352-201ENSMUST00000184495 116 ntBASIC1.92□□□□□ -2.1
Sdc4O35988 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.92□□□□□ -2.1
Sdc4O35988 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC1.92□□□□□ -2.1
Sdc4O35988 Gm43345-201ENSMUST00000199484 269 ntBASIC1.92□□□□□ -2.1
Sdc4O35988 Gm44938-201ENSMUST00000208614 427 ntBASIC1.92□□□□□ -2.1
Sdc4O35988 CT009713.6-201ENSMUST00000223615 294 ntBASIC1.92□□□□□ -2.1
Sdc4O35988 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.92□□□□□ -2.1
Sdc4O35988 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Sdc4O35988 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Sdc4O35988 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Sdc4O35988 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Sdc4O35988 Gm16100-201ENSMUST00000120489 231 ntBASIC1.91□□□□□ -2.1
Sdc4O35988 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Sdc4O35988 Gm24601-201ENSMUST00000157970 143 ntBASIC1.91□□□□□ -2.1
Sdc4O35988 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Sdc4O35988 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
Sdc4O35988 Gm37778-201ENSMUST00000191732 190 ntBASIC1.91□□□□□ -2.1
Sdc4O35988 Gm37732-201ENSMUST00000194377 316 ntBASIC1.91□□□□□ -2.1
Sdc4O35988 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Sdc4O35988 Gm45382-201ENSMUST00000210607 151 ntBASIC1.91□□□□□ -2.1
Sdc4O35988 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
Sdc4O35988 AC167977.1-201ENSMUST00000221384 234 ntBASIC1.91□□□□□ -2.1
Sdc4O35988 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.91□□□□□ -2.1
Sdc4O35988 AC159293.2-201ENSMUST00000222289 424 ntBASIC1.91□□□□□ -2.1
Sdc4O35988 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.91□□□□□ -2.1
Sdc4O35988 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Sdc4O35988 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Sdc4O35988 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Sdc4O35988 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.91□□□□□ -2.1
Sdc4O35988 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.9□□□□□ -2.11
Sdc4O35988 Gm16400-201ENSMUST00000116523 1029 ntBASIC1.9□□□□□ -2.11
Sdc4O35988 Gm12392-201ENSMUST00000118014 938 ntBASIC1.9□□□□□ -2.11
Sdc4O35988 Gm23230-201ENSMUST00000157298 133 ntBASIC1.9□□□□□ -2.11
Sdc4O35988 Gm23588-201ENSMUST00000157659 99 ntBASIC1.9□□□□□ -2.11
Sdc4O35988 Gm22099-201ENSMUST00000157925 123 ntBASIC1.9□□□□□ -2.11
Sdc4O35988 Gm26024-201ENSMUST00000158657 322 ntBASIC1.9□□□□□ -2.11
Sdc4O35988 Mir6950-201ENSMUST00000184438 73 ntBASIC1.9□□□□□ -2.11
Sdc4O35988 Gm37708-201ENSMUST00000192337 895 ntBASIC1.9□□□□□ -2.11
Sdc4O35988 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.9□□□□□ -2.11
Sdc4O35988 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.9□□□□□ -2.11
Sdc4O35988 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.9□□□□□ -2.11
Sdc4O35988 AC126043.1-201ENSMUST00000221304 1141 ntBASIC1.9□□□□□ -2.11
Sdc4O35988 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.9□□□□□ -2.11
Sdc4O35988 AC115735.3-201ENSMUST00000227757 513 ntBASIC1.9□□□□□ -2.11
Sdc4O35988 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Sdc4O35988 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC1.9□□□□□ -2.11
Sdc4O35988 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Sdc4O35988 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Sdc4O35988 Gm24142-201ENSMUST00000101960 107 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Gm22019-201ENSMUST00000104359 96 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Gm15037-201ENSMUST00000120358 259 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Gm23887-201ENSMUST00000122683 172 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Gm1989-201ENSMUST00000126244 636 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Gm24394-201ENSMUST00000158141 123 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Gm17161-201ENSMUST00000169187 524 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Gm23813-201ENSMUST00000175153 77 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Mir7225-201ENSMUST00000184178 54 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Gm44408-201ENSMUST00000200205 66 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Gm44274-201ENSMUST00000203417 256 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Sdc4O35988 Gm22683-201ENSMUST00000082854 137 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC1.89□□□□□ -2.11
Sdc4O35988 Gm14442-201ENSMUST00000119690 1736 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Gm42701-201ENSMUST00000196117 1657 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Gm25647-201ENSMUST00000101832 78 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Gm25823-201ENSMUST00000101995 78 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Gm15896-201ENSMUST00000118045 440 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Gm12891-201ENSMUST00000119358 240 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Gm15760-201ENSMUST00000119553 283 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC1.88□□□□□ -2.11
Sdc4O35988 Gm24220-201ENSMUST00000177753 79 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Gm25988-201ENSMUST00000177759 79 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Gm23471-201ENSMUST00000177886 79 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Gm26488-201ENSMUST00000178225 79 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Gm23449-201ENSMUST00000179208 79 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Gm25221-201ENSMUST00000180051 79 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Mir7679-201ENSMUST00000183379 63 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Sdc4O35988 Gm37119-201ENSMUST00000195691 389 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.88□□□□□ -2.11
Sdc4O35988 AC153506.2-201ENSMUST00000218051 257 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms