Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Mir3620-201ENSMUST00000184710 61 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Mir6975-201ENSMUST00000184879 61 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm28717-201ENSMUST00000189950 315 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm18964-201ENSMUST00000193013 563 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm44354-201ENSMUST00000196017 143 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm44852-201ENSMUST00000207950 369 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm10212-201ENSMUST00000087884 324 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Olfr895-201ENSMUST00000093864 951 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Shisa8J3QNX5 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm23273-201ENSMUST00000104058 135 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm14627-201ENSMUST00000118931 567 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm22073-201ENSMUST00000122668 189 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm5963-201ENSMUST00000143451 236 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm25624-201ENSMUST00000157222 275 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm26148-201ENSMUST00000157430 68 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm24504-201ENSMUST00000157679 100 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm22889-201ENSMUST00000158639 58 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm20399-201ENSMUST00000174652 132 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm28951-201ENSMUST00000190742 313 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm37586-201ENSMUST00000193654 204 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm37575-201ENSMUST00000195467 309 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm44650-201ENSMUST00000206929 194 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm45344-201ENSMUST00000211610 341 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm30674-201ENSMUST00000214523 392 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Snord42a-201ENSMUST00000082606 65 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shisa8J3QNX5 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm22493-201ENSMUST00000104494 132 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm15148-201ENSMUST00000117602 156 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm14570-201ENSMUST00000119444 391 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm11600-201ENSMUST00000119592 240 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm15106-201ENSMUST00000119691 821 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm14980-201ENSMUST00000121247 736 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm14578-201ENSMUST00000122166 391 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm23213-201ENSMUST00000122715 313 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm22986-201ENSMUST00000122753 130 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm16232-201ENSMUST00000162856 167 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm7925-201ENSMUST00000166690 401 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Mir5134-201ENSMUST00000175529 78 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm42453-201ENSMUST00000200477 409 ntBASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Shisa8J3QNX5 Gm43415-201ENSMUST00000201934 750 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms