Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm23629-201ENSMUST00000082465 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm23924-201ENSMUST00000082474 108 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm22246-201ENSMUST00000082478 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm22749-201ENSMUST00000082490 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm22747-201ENSMUST00000082495 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm23296-201ENSMUST00000082555 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm22063-201ENSMUST00000082560 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm26129-201ENSMUST00000082719 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm24859-201ENSMUST00000082729 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm23057-201ENSMUST00000082801 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm26328-201ENSMUST00000082821 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm26331-201ENSMUST00000082824 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm24205-201ENSMUST00000082953 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm25405-201ENSMUST00000082973 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm22628-201ENSMUST00000082988 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm26324-201ENSMUST00000083073 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm24535-201ENSMUST00000083140 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm26496-201ENSMUST00000083150 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm26127-201ENSMUST00000083193 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm24456-201ENSMUST00000083198 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm24458-201ENSMUST00000083204 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm24018-201ENSMUST00000083232 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm25794-201ENSMUST00000083286 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm25790-201ENSMUST00000083293 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm22295-201ENSMUST00000083311 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm25127-201ENSMUST00000083336 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm25583-201ENSMUST00000083413 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm25577-201ENSMUST00000083414 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm24414-201ENSMUST00000083434 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm24861-201ENSMUST00000083459 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Mir10a-201ENSMUST00000083585 110 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm24803-201ENSMUST00000083693 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm23103-201ENSMUST00000083725 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm22580-201ENSMUST00000083727 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm24260-201ENSMUST00000083741 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm23732-201ENSMUST00000083751 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm22682-201ENSMUST00000083854 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm25869-201ENSMUST00000083855 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm24693-201ENSMUST00000083885 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm26317-201ENSMUST00000083894 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm22352-201ENSMUST00000083917 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm24448-201ENSMUST00000083979 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm22798-201ENSMUST00000083992 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm26427-201ENSMUST00000093648 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm22886-201ENSMUST00000093714 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm22170-201ENSMUST00000097247 107 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.28□□□□□ -1.72
Trim55G3X8Y1 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm22899-201ENSMUST00000104540 131 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm8145-201ENSMUST00000118220 745 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm15120-201ENSMUST00000120602 301 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm11456-201ENSMUST00000121070 256 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm26101-201ENSMUST00000157246 105 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm22098-201ENSMUST00000157930 85 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm24188-201ENSMUST00000157980 108 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Mir6943-201ENSMUST00000185186 66 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm44402-201ENSMUST00000203677 238 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm44811-201ENSMUST00000209120 228 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm29774-201ENSMUST00000219270 436 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm26447-201ENSMUST00000082448 129 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Snora70-201ENSMUST00000083047 137 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm22826-201ENSMUST00000083774 165 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.27□□□□□ -1.73
Trim55G3X8Y1 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim55G3X8Y1 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.26□□□□□ -1.73
Trim55G3X8Y1 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Gm13876-201ENSMUST00000118451 261 ntBASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Gm13155-201ENSMUST00000119277 646 ntBASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Gm8178-201ENSMUST00000121570 646 ntBASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Gm11363-201ENSMUST00000121672 548 ntBASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Gm22611-201ENSMUST00000158288 150 ntBASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Gm26400-201ENSMUST00000175012 85 ntBASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC4.26□□□□□ -1.73
Trim55G3X8Y1 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms