Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm22444-201ENSMUST00000093693 108 ntBASIC2.16□□□□□ -2.06
Chd3B1AR17 Gm22170-201ENSMUST00000097247 107 ntBASIC2.16□□□□□ -2.06
Chd3B1AR17 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Chd3B1AR17 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.16□□□□□ -2.06
Chd3B1AR17 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Chd3B1AR17 Gm25094-201ENSMUST00000103992 131 ntBASIC2.16□□□□□ -2.06
Chd3B1AR17 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.16□□□□□ -2.06
Chd3B1AR17 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.16□□□□□ -2.06
Chd3B1AR17 Gm13080-201ENSMUST00000120556 420 ntBASIC2.16□□□□□ -2.06
Chd3B1AR17 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.16□□□□□ -2.06
Chd3B1AR17 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Chd3B1AR17 Gm44727-201ENSMUST00000204225 451 ntBASIC2.16□□□□□ -2.06
Chd3B1AR17 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Chd3B1AR17 Mir423-201ENSMUST00000083584 109 ntBASIC2.16□□□□□ -2.06
Chd3B1AR17 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Chd3B1AR17 Gm15452-201ENSMUST00000119877 240 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Gm6591-201ENSMUST00000121063 434 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Gm24592-201ENSMUST00000122505 106 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Gm16328-201ENSMUST00000126985 196 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Gm23043-201ENSMUST00000157890 109 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Nron-204ENSMUST00000158971 370 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Gm22716-201ENSMUST00000177596 107 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Gm9541-201ENSMUST00000188409 502 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Trbv22-201ENSMUST00000191697 291 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Gm37037-201ENSMUST00000194475 424 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.15□□□□□ -2.07
Chd3B1AR17 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC2.15□□□□□ -2.07
Chd3B1AR17 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.15□□□□□ -2.07
Chd3B1AR17 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Chd3B1AR17 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.15□□□□□ -2.07
Chd3B1AR17 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Chd3B1AR17 Gm26154-201ENSMUST00000102339 96 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Gm14823-201ENSMUST00000117698 238 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Gm11352-201ENSMUST00000119264 517 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Gm22390-201ENSMUST00000157588 325 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Gm23223-201ENSMUST00000158119 127 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Gm24813-201ENSMUST00000175310 84 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Gm25598-201ENSMUST00000179031 107 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Gm45696-201ENSMUST00000212088 985 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.14□□□□□ -2.07
Chd3B1AR17 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Chd3B1AR17 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Chd3B1AR17 Mir344e-201ENSMUST00000104677 66 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Gm12550-201ENSMUST00000118478 329 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Gm21809-201ENSMUST00000178495 468 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.14□□□□□ -2.07
Chd3B1AR17 Gm37162-201ENSMUST00000191708 551 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.14□□□□□ -2.07
Chd3B1AR17 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.14□□□□□ -2.07
Chd3B1AR17 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 CT025552.1-201ENSMUST00000224561 521 ntBASIC2.14□□□□□ -2.07
Chd3B1AR17 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.14□□□□□ -2.07
Chd3B1AR17 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Chd3B1AR17 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Chd3B1AR17 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Mir758-201ENSMUST00000103260 81 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm26077-201ENSMUST00000104064 123 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm12155-201ENSMUST00000121267 160 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm12238-201ENSMUST00000127764 124 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm23205-201ENSMUST00000158671 103 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm28788-201ENSMUST00000189717 375 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm29558-201ENSMUST00000190134 375 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm18551-201ENSMUST00000195594 642 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm45316-201ENSMUST00000210128 162 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm22806-201ENSMUST00000082738 136 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm22683-201ENSMUST00000082854 137 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Chd3B1AR17 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Chd3B1AR17 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Chd3B1AR17 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm25170-201ENSMUST00000104191 129 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm22957-201ENSMUST00000122511 123 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm22093-201ENSMUST00000158980 111 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm20534-201ENSMUST00000172957 172 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC2.13□□□□□ -2.07
Chd3B1AR17 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.13□□□□□ -2.07
Chd3B1AR17 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.12□□□□□ -2.07
Chd3B1AR17 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Chd3B1AR17 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms