Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Mir222-201ENSMUST00000083537 79 ntBASIC2.33□□□□□ -2.04
Scn3aA2ASI5 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Scn3aA2ASI5 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Scn3aA2ASI5 Gm22072-201ENSMUST00000116850 121 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm24478-201ENSMUST00000157439 158 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm27715-201ENSMUST00000184714 260 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Mir8090-201ENSMUST00000185078 136 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm19498-201ENSMUST00000191128 331 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm45696-201ENSMUST00000212088 985 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm45772-201ENSMUST00000212961 240 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm46146-201ENSMUST00000217483 346 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm24098-201ENSMUST00000102075 109 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm25381-201ENSMUST00000102078 109 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Mir758-201ENSMUST00000103260 81 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm23431-201ENSMUST00000104006 107 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm23043-201ENSMUST00000157890 109 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm25981-201ENSMUST00000157921 295 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm24601-201ENSMUST00000157970 143 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm22159-201ENSMUST00000158412 130 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Mir7679-201ENSMUST00000183379 63 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm19193-201ENSMUST00000190263 590 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm19457-201ENSMUST00000200995 448 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm9174-201ENSMUST00000078149 255 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Scn3aA2ASI5 Gm15846-201ENSMUST00000116022 320 ntBASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Gm12016-201ENSMUST00000119079 681 ntBASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Gm12935-201ENSMUST00000119352 246 ntBASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Gm12891-201ENSMUST00000119358 240 ntBASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Gm14989-201ENSMUST00000120497 207 ntBASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Gm43541-201ENSMUST00000197208 581 ntBASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Gm44615-201ENSMUST00000206548 358 ntBASIC2.31□□□□□ -2.04
Scn3aA2ASI5 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Gm22683-201ENSMUST00000082854 137 ntBASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Scn3aA2ASI5 Mir667-201ENSMUST00000102441 92 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm23011-201ENSMUST00000104148 132 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm15125-201ENSMUST00000116185 800 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm11252-201ENSMUST00000120572 939 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm23463-201ENSMUST00000122468 99 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm22960-201ENSMUST00000122517 104 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm14368-201ENSMUST00000145305 415 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm25341-201ENSMUST00000157461 268 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm22776-201ENSMUST00000178634 94 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm23767-201ENSMUST00000179278 94 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm44092-201ENSMUST00000204470 258 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm18453-201ENSMUST00000208000 626 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Snord104-201ENSMUST00000083192 70 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gm23102-201ENSMUST00000083724 116 ntBASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Scn3aA2ASI5 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms