Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm25420-201ENSMUST00000104216 127 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm13640-201ENSMUST00000118445 264 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm6664-201ENSMUST00000119138 468 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm25979-201ENSMUST00000157177 138 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm24911-201ENSMUST00000157292 136 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm23032-201ENSMUST00000157995 107 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm24546-201ENSMUST00000158652 102 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm6395-201ENSMUST00000167639 691 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Mir6926-201ENSMUST00000184562 68 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm43531-201ENSMUST00000200676 1114 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm17893-201ENSMUST00000203017 770 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm18488-201ENSMUST00000215082 364 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm650-201ENSMUST00000144428 1551 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Gm37479-201ENSMUST00000194169 3841 ntBASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm24118-201ENSMUST00000103972 126 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm22590-201ENSMUST00000104247 128 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm15846-201ENSMUST00000116022 320 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm15452-201ENSMUST00000119877 240 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm12045-201ENSMUST00000122122 573 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm24443-201ENSMUST00000157242 132 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm23819-201ENSMUST00000158744 109 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm21726-201ENSMUST00000179654 392 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Mir6907-201ENSMUST00000183764 71 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm37331-201ENSMUST00000192367 3375 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm44118-201ENSMUST00000204665 229 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm44964-201ENSMUST00000207011 273 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm19709-201ENSMUST00000215403 482 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm19326-201ENSMUST00000219818 326 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm19118-201ENSMUST00000222554 98 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm23264-201ENSMUST00000083372 107 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm16261-201ENSMUST00000096813 205 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 AC124561.2-201ENSMUST00000226657 1973 ntBASIC1.87□□□□□ -2.11
Trav11A0A0B4J1J9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm11784-201ENSMUST00000118568 474 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm12507-201ENSMUST00000119155 415 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm15106-201ENSMUST00000119691 821 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm15112-201ENSMUST00000120152 860 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm14739-201ENSMUST00000120424 802 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm22452-201ENSMUST00000122804 104 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm14389-201ENSMUST00000140453 241 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm25427-201ENSMUST00000157605 103 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm23033-201ENSMUST00000157996 134 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm18520-201ENSMUST00000174783 658 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm24111-201ENSMUST00000175491 97 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm26177-201ENSMUST00000178683 107 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm27786-201ENSMUST00000184337 70 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Trbv6-201ENSMUST00000193743 276 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC1.86□□□□□ -2.11
Trav11A0A0B4J1J9 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms