Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm5967-201ENSMUST00000172723 494 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm22853-201ENSMUST00000174974 131 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Mir5710-201ENSMUST00000176884 69 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm23144-201ENSMUST00000180226 107 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm27957-201ENSMUST00000184054 127 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Mir8096-201ENSMUST00000184526 127 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm28404-201ENSMUST00000190242 453 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm17966-201ENSMUST00000193453 594 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm44295-201ENSMUST00000203805 437 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm45245-201ENSMUST00000210082 376 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm8125-201ENSMUST00000216602 738 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 AC124746.2-201ENSMUST00000226594 427 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm22740-201ENSMUST00000083439 109 ntBASIC2.88□□□□□ -1.95
H2afb1S4R1E0 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
H2afb1S4R1E0 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm13717-201ENSMUST00000119868 365 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm13751-201ENSMUST00000120280 752 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm15037-201ENSMUST00000120358 259 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Mir3104-201ENSMUST00000174911 63 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm23415-201ENSMUST00000175519 83 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Mir5136-201ENSMUST00000175573 76 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm21754-201ENSMUST00000177550 479 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm25817-201ENSMUST00000177758 121 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm24766-201ENSMUST00000179182 121 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm21726-201ENSMUST00000179654 392 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm38044-201ENSMUST00000192964 487 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm37523-201ENSMUST00000194901 412 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm43899-201ENSMUST00000203675 246 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm21007-201ENSMUST00000221024 326 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gnrh1-202ENSMUST00000223929 428 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm24268-201ENSMUST00000082990 110 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm5670-201ENSMUST00000093546 372 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.87□□□□□ -1.95
H2afb1S4R1E0 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm37848-201ENSMUST00000195288 3103 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm14594-201ENSMUST00000118052 537 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm14590-201ENSMUST00000118934 537 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm14656-201ENSMUST00000120342 502 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm4916-201ENSMUST00000126139 642 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm22320-201ENSMUST00000157149 312 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm22059-201ENSMUST00000157544 104 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm22858-201ENSMUST00000174972 76 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm22290-201ENSMUST00000177655 107 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm22583-201ENSMUST00000178031 107 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm21816-201ENSMUST00000179255 360 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm26189-201ENSMUST00000179879 107 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm14596-201ENSMUST00000180268 537 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm14595-201ENSMUST00000180335 537 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm27599-201ENSMUST00000183758 174 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm37757-201ENSMUST00000193072 210 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm44609-201ENSMUST00000207157 460 ntBASIC2.86□□□□□ -1.95
H2afb1S4R1E0 Gm19126-201ENSMUST00000207896 509 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms