Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Scn11aQ9R053 Gm15896-201ENSMUST00000118045 440 ntBASIC1.99□□□□□ -2.09
Scn11aQ9R053 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC1.99□□□□□ -2.09
Scn11aQ9R053 AC122418.1-201ENSMUST00000225012 511 ntBASIC1.99□□□□□ -2.09
Scn11aQ9R053 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Scn11aQ9R053 Gm37407-201ENSMUST00000194793 1316 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm26099-201ENSMUST00000157248 109 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm25051-201ENSMUST00000158602 249 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm20915-201ENSMUST00000191575 663 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm18855-201ENSMUST00000206689 570 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm22866-201ENSMUST00000083947 177 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Scn11aQ9R053 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm12512-201ENSMUST00000119620 217 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm25339-201ENSMUST00000157458 232 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm24572-201ENSMUST00000175505 88 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm7909-201ENSMUST00000182688 614 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm29429-201ENSMUST00000187071 121 ntBASIC1.98□□□□□ -2.09
Scn11aQ9R053 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Scn11aQ9R053 Mir343-201ENSMUST00000102360 75 ntBASIC1.97□□□□□ -2.09
Scn11aQ9R053 Gm24288-201ENSMUST00000157630 144 ntBASIC1.97□□□□□ -2.09
Scn11aQ9R053 Gm27245-201ENSMUST00000184385 376 ntBASIC1.97□□□□□ -2.09
Scn11aQ9R053 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.97□□□□□ -2.09
Scn11aQ9R053 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC1.97□□□□□ -2.09
Scn11aQ9R053 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.97□□□□□ -2.09
Scn11aQ9R053 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.97□□□□□ -2.09
Scn11aQ9R053 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.97□□□□□ -2.09
Scn11aQ9R053 Gm9628-201ENSMUST00000222169 725 ntBASIC1.97□□□□□ -2.09
Scn11aQ9R053 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Scn11aQ9R053 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Scn11aQ9R053 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Scn11aQ9R053 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Scn11aQ9R053 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.96□□□□□ -2.1
Scn11aQ9R053 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Scn11aQ9R053 Gm13153-201ENSMUST00000120969 637 ntBASIC1.96□□□□□ -2.1
Scn11aQ9R053 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC1.96□□□□□ -2.1
Scn11aQ9R053 Gm22794-201ENSMUST00000157228 306 ntBASIC1.96□□□□□ -2.1
Scn11aQ9R053 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.96□□□□□ -2.1
Scn11aQ9R053 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC1.96□□□□□ -2.1
Scn11aQ9R053 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC1.96□□□□□ -2.1
Scn11aQ9R053 AC160970.1-201ENSMUST00000219311 475 ntBASIC1.96□□□□□ -2.1
Scn11aQ9R053 AC170086.1-201ENSMUST00000225190 497 ntBASIC1.96□□□□□ -2.1
Scn11aQ9R053 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.96□□□□□ -2.1
Scn11aQ9R053 Gm22353-201ENSMUST00000083918 136 ntBASIC1.96□□□□□ -2.1
Scn11aQ9R053 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Scn11aQ9R053 Gm25416-201ENSMUST00000104221 107 ntBASIC1.95□□□□□ -2.1
Scn11aQ9R053 Gm26181-201ENSMUST00000157687 106 ntBASIC1.95□□□□□ -2.1
Scn11aQ9R053 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC1.95□□□□□ -2.1
Scn11aQ9R053 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.95□□□□□ -2.1
Scn11aQ9R053 Gm43070-201ENSMUST00000196938 415 ntBASIC1.95□□□□□ -2.1
Scn11aQ9R053 Gm45742-201ENSMUST00000212400 433 ntBASIC1.95□□□□□ -2.1
Scn11aQ9R053 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.95□□□□□ -2.1
Scn11aQ9R053 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.95□□□□□ -2.1
Scn11aQ9R053 Gm11352-201ENSMUST00000119264 517 ntBASIC1.95□□□□□ -2.1
Scn11aQ9R053 Gm24770-201ENSMUST00000158505 92 ntBASIC1.95□□□□□ -2.1
Scn11aQ9R053 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.95□□□□□ -2.1
Scn11aQ9R053 Gm23249-201ENSMUST00000083369 161 ntBASIC1.95□□□□□ -2.1
Scn11aQ9R053 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
Scn11aQ9R053 Gm11357-201ENSMUST00000119758 954 ntBASIC1.94□□□□□ -2.1
Scn11aQ9R053 Gm25279-201ENSMUST00000122608 133 ntBASIC1.94□□□□□ -2.1
Scn11aQ9R053 Gm13194-201ENSMUST00000142299 311 ntBASIC1.94□□□□□ -2.1
Scn11aQ9R053 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Scn11aQ9R053 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC1.94□□□□□ -2.1
Scn11aQ9R053 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.94□□□□□ -2.1
Scn11aQ9R053 Gm15095-201ENSMUST00000118996 1430 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Gm23015-201ENSMUST00000104145 128 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Gm25787-201ENSMUST00000104709 92 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Gm22665-201ENSMUST00000158720 275 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Gm37676-201ENSMUST00000195496 507 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Gm43224-201ENSMUST00000201567 898 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC1.93□□□□□ -2.1
Scn11aQ9R053 AC132121.1-201ENSMUST00000220774 332 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Scn11aQ9R053 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Scn11aQ9R053 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.93□□□□□ -2.1
Scn11aQ9R053 Snord14d-201ENSMUST00000083424 86 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Gm23329-201ENSMUST00000157415 108 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Gm23476-201ENSMUST00000158881 274 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Gm25958-201ENSMUST00000175114 71 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Gm6801-201ENSMUST00000190697 339 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC1.93□□□□□ -2.1
Scn11aQ9R053 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Scn11aQ9R053 Gm23623-201ENSMUST00000082461 107 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 n-R5s196-201ENSMUST00000083136 117 ntBASIC1.93□□□□□ -2.1
Scn11aQ9R053 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.92□□□□□ -2.1
Scn11aQ9R053 Gm13510-201ENSMUST00000118659 429 ntBASIC1.92□□□□□ -2.1
Scn11aQ9R053 Gm23033-201ENSMUST00000157996 134 ntBASIC1.92□□□□□ -2.1
Scn11aQ9R053 Samd15-201ENSMUST00000169669 1194 ntBASIC1.92□□□□□ -2.1
Scn11aQ9R053 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC1.92□□□□□ -2.1
Scn11aQ9R053 Gm6651-201ENSMUST00000189471 271 ntBASIC1.92□□□□□ -2.1
Scn11aQ9R053 Gm36974-201ENSMUST00000194200 1071 ntBASIC1.92□□□□□ -2.1
Scn11aQ9R053 Gm45192-201ENSMUST00000206749 283 ntBASIC1.92□□□□□ -2.1
Scn11aQ9R053 Gm44555-201ENSMUST00000209008 148 ntBASIC1.92□□□□□ -2.1
Scn11aQ9R053 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Scn11aQ9R053 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Scn11aQ9R053 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 126.6 ms