Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Gm15022-201ENSMUST00000122074 746 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Gm25544-201ENSMUST00000122676 120 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Gm22320-201ENSMUST00000157149 312 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Gm23806-201ENSMUST00000175157 109 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Gm28314-201ENSMUST00000191276 345 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Gm7449-201ENSMUST00000194393 663 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 AC134254.5-201ENSMUST00000223436 400 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 AC158805.1-201ENSMUST00000218197 2631 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Msh5Q9QUM7 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm14472-201ENSMUST00000119815 282 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm11742-201ENSMUST00000119903 233 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm25267-201ENSMUST00000158522 63 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm27602-201ENSMUST00000183861 111 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Mir7220-201ENSMUST00000183978 60 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm34176-201ENSMUST00000192621 474 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Mir6516-201ENSMUST00000196236 110 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Msh5Q9QUM7 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 AC158921.1-201ENSMUST00000227861 3468 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm25418-201ENSMUST00000104214 129 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm13432-201ENSMUST00000118861 241 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm12936-201ENSMUST00000121439 301 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm25825-201ENSMUST00000157091 124 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm24726-201ENSMUST00000158232 121 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Mir6412-201ENSMUST00000184477 97 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm28623-201ENSMUST00000187219 192 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Ighv1-1-201ENSMUST00000194912 291 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm37235-201ENSMUST00000195171 59 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm29704-201ENSMUST00000196011 253 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm44371-201ENSMUST00000204148 467 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm45750-201ENSMUST00000211966 354 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 AC158523.1-201ENSMUST00000221398 328 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msh5Q9QUM7 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 115.1 ms