Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.46□□□□□ -2.02
Trem1Q9JKE2 Gm35558-202ENSMUST00000221819 499 ntBASIC2.46□□□□□ -2.02
Trem1Q9JKE2 Gm19118-201ENSMUST00000222554 98 ntBASIC2.46□□□□□ -2.02
Trem1Q9JKE2 Gm5471-201ENSMUST00000072732 337 ntBASIC2.46□□□□□ -2.02
Trem1Q9JKE2 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trem1Q9JKE2 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trem1Q9JKE2 Gm25203-201ENSMUST00000082842 215 ntBASIC2.46□□□□□ -2.02
Trem1Q9JKE2 Gm25755-201ENSMUST00000083396 107 ntBASIC2.46□□□□□ -2.02
Trem1Q9JKE2 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Trem1Q9JKE2 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Trem1Q9JKE2 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Gm25833-201ENSMUST00000104137 133 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Gm15452-201ENSMUST00000119877 240 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Gm7363-201ENSMUST00000119883 399 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Gm14389-201ENSMUST00000140453 241 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Gm23933-201ENSMUST00000178405 79 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Mir8118-201ENSMUST00000183962 129 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Gm43284-201ENSMUST00000200103 253 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Gm43026-201ENSMUST00000202972 325 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC2.45□□□□□ -2.02
Trem1Q9JKE2 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.45□□□□□ -2.02
Trem1Q9JKE2 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Gm26203-201ENSMUST00000082911 114 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Gm24533-201ENSMUST00000083138 196 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Trem1Q9JKE2 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.45□□□□□ -2.02
Trem1Q9JKE2 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
Trem1Q9JKE2 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm11460-201ENSMUST00000118200 361 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm12935-201ENSMUST00000119352 246 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm14588-201ENSMUST00000119895 172 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm25835-201ENSMUST00000158917 144 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Mir5123-201ENSMUST00000177794 83 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm24264-201ENSMUST00000179835 94 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Mir6963-201ENSMUST00000183535 71 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Mir6363-201ENSMUST00000184880 114 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm43722-201ENSMUST00000196054 124 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm43746-201ENSMUST00000200028 317 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm44084-201ENSMUST00000203947 409 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm45636-201ENSMUST00000210497 1064 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm18000-201ENSMUST00000212153 800 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm46369-201ENSMUST00000221577 401 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm23247-201ENSMUST00000083373 107 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm16261-201ENSMUST00000096813 205 ntBASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trem1Q9JKE2 Gm28359-201ENSMUST00000187470 1322 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm12814-201ENSMUST00000117091 846 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm13349-201ENSMUST00000118436 411 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm14989-201ENSMUST00000120497 207 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm15900-201ENSMUST00000161584 342 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm17064-201ENSMUST00000167690 452 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21842-201ENSMUST00000177552 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21626-201ENSMUST00000177791 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21562-201ENSMUST00000177888 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21539-201ENSMUST00000177925 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm17522-201ENSMUST00000178144 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21599-201ENSMUST00000178249 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21914-201ENSMUST00000178452 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21723-201ENSMUST00000178692 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21916-201ENSMUST00000178771 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21801-201ENSMUST00000178865 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21633-201ENSMUST00000178941 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21821-201ENSMUST00000179646 498 ntBASIC2.43□□□□□ -2.02
Trem1Q9JKE2 Gm21588-201ENSMUST00000180074 498 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms