Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ube3bQ9ES34 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Ube3bQ9ES34 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ube3bQ9ES34 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ube3bQ9ES34 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ube3bQ9ES34 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm23577-201ENSMUST00000103950 110 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm15926-201ENSMUST00000120492 550 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm15263-201ENSMUST00000121556 642 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 n-R5s192-201ENSMUST00000122577 119 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm7582-201ENSMUST00000160831 603 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm3851-201ENSMUST00000168653 318 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm24520-201ENSMUST00000179510 110 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm27233-201ENSMUST00000184030 307 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Ighv1-32-201ENSMUST00000195149 351 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Igkv2-113-201ENSMUST00000196138 362 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Igkv9-128-201ENSMUST00000196602 353 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm45778-201ENSMUST00000211959 153 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm45907-201ENSMUST00000213023 193 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Gm23264-201ENSMUST00000083372 107 ntBASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ube3bQ9ES34 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm25054-201ENSMUST00000157370 97 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm22349-201ENSMUST00000157864 107 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm26157-201ENSMUST00000158974 126 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm17187-201ENSMUST00000164622 410 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm27883-201ENSMUST00000183941 102 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm28967-201ENSMUST00000187351 281 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm37836-201ENSMUST00000195875 175 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm17811-201ENSMUST00000206193 387 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm45499-201ENSMUST00000211656 280 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm7065-201ENSMUST00000222150 474 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm23039-201ENSMUST00000083870 161 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 AC125223.3-201ENSMUST00000223588 2067 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm19428-201ENSMUST00000220512 1995 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.47□□□□□ -1.53
Ube3bQ9ES34 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ube3bQ9ES34 Gm37788-201ENSMUST00000193958 2705 ntBASIC5.46□□□□□ -1.53
Ube3bQ9ES34 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Ube3bQ9ES34 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Ube3bQ9ES34 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Ube3bQ9ES34 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Gm25421-201ENSMUST00000104218 164 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Gm13504-201ENSMUST00000117490 316 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Gm14619-201ENSMUST00000120480 168 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Gm4916-201ENSMUST00000126139 642 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Gm23466-201ENSMUST00000157133 106 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Gm22321-201ENSMUST00000157152 104 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Gm18520-201ENSMUST00000174783 658 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Gm29781-201ENSMUST00000203862 478 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Gm45013-201ENSMUST00000206883 178 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 AC173345.2-201ENSMUST00000222795 153 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 AC183092.1-201ENSMUST00000224301 153 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Snora2b-201ENSMUST00000084005 137 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Gm42659-201ENSMUST00000196955 1754 ntBASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ube3bQ9ES34 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ube3bQ9ES34 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ube3bQ9ES34 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.45□□□□□ -1.54
Ube3bQ9ES34 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ube3bQ9ES34 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.45□□□□□ -1.54
Ube3bQ9ES34 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Ube3bQ9ES34 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms