Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm29307-201ENSMUST00000187367 696 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm29339-201ENSMUST00000189613 696 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm28159-201ENSMUST00000190296 696 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm29407-201ENSMUST00000191468 696 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm43431-201ENSMUST00000198577 340 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm43227-201ENSMUST00000202239 677 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm29848-201ENSMUST00000203107 295 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Gm45588-201ENSMUST00000211213 630 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 AC131720.2-201ENSMUST00000220420 431 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim54Q9ERP3 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim54Q9ERP3 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.69□□□□□ -1.82
Trim54Q9ERP3 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm25168-201ENSMUST00000104189 132 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm12268-201ENSMUST00000118398 442 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm23391-201ENSMUST00000157579 104 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm23124-201ENSMUST00000157650 107 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm17162-201ENSMUST00000168538 473 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm20612-201ENSMUST00000176318 236 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm27999-201ENSMUST00000183539 193 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm27374-201ENSMUST00000183660 81 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm28299-201ENSMUST00000189908 339 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm18964-201ENSMUST00000193013 563 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm43932-201ENSMUST00000204499 52 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm44754-201ENSMUST00000208155 400 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm7948-201ENSMUST00000212607 844 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 AC162387.1-201ENSMUST00000213369 213 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Gm46312-201ENSMUST00000220961 420 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trim54Q9ERP3 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm14570-201ENSMUST00000119444 391 ntBASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm12118-201ENSMUST00000119766 532 ntBASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm14694-201ENSMUST00000121856 282 ntBASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm25967-201ENSMUST00000157168 147 ntBASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm20534-201ENSMUST00000172957 172 ntBASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm24811-201ENSMUST00000175313 100 ntBASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm4479-201ENSMUST00000178807 171 ntBASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm27308-201ENSMUST00000184807 233 ntBASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm29330-201ENSMUST00000190032 699 ntBASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 AC154747.1-201ENSMUST00000225265 239 ntBASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Gm23650-201ENSMUST00000083355 70 ntBASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Trim54Q9ERP3 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Gm7916-201ENSMUST00000120325 456 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Gm26100-201ENSMUST00000157245 127 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Gm23592-201ENSMUST00000157859 117 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Gm3370-201ENSMUST00000171785 500 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Gm26195-201ENSMUST00000175035 101 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Gm27445-201ENSMUST00000184484 72 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Gm29216-201ENSMUST00000187117 492 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Gm32340-201ENSMUST00000192883 259 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Gm44465-201ENSMUST00000199536 114 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 AC157017.1-201ENSMUST00000220148 364 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Snora70-201ENSMUST00000083047 137 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.66□□□□□ -1.82
Trim54Q9ERP3 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Trim54Q9ERP3 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Trim54Q9ERP3 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.65□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms