Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm23939-201ENSMUST00000082880 133 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Gm25792-201ENSMUST00000083289 100 ntBASIC2.25□□□□□ -2.05
Lima1Q9ERG0 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Mir344c-201ENSMUST00000103919 92 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm24126-201ENSMUST00000104111 106 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Lima1Q9ERG0 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm13085-201ENSMUST00000118356 171 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Lima1Q9ERG0 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm24552-201ENSMUST00000158646 103 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Mir3076-201ENSMUST00000175415 60 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Mir6371-201ENSMUST00000184470 111 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm43355-201ENSMUST00000196541 346 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm43043-201ENSMUST00000196579 412 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm44585-201ENSMUST00000207150 607 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm44656-201ENSMUST00000208428 490 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm18268-201ENSMUST00000208445 943 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm44657-201ENSMUST00000208568 450 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm5471-201ENSMUST00000072732 337 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm24928-201ENSMUST00000083399 107 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Gm25897-201ENSMUST00000083709 107 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.24□□□□□ -2.05
Lima1Q9ERG0 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm13731-201ENSMUST00000117332 196 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm12721-201ENSMUST00000120621 268 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm14411-201ENSMUST00000121798 914 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm22960-201ENSMUST00000122517 104 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm16510-201ENSMUST00000153501 249 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm22534-201ENSMUST00000158173 104 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm16326-201ENSMUST00000162843 414 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm25799-201ENSMUST00000082643 107 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm22806-201ENSMUST00000082738 136 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Mir137-201ENSMUST00000083635 73 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.23□□□□□ -2.05
Lima1Q9ERG0 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm11598-201ENSMUST00000119257 357 ntBASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm25866-201ENSMUST00000158245 112 ntBASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm25026-201ENSMUST00000175017 188 ntBASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm20648-201ENSMUST00000175815 328 ntBASIC2.22□□□□□ -2.05
Lima1Q9ERG0 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm24968-201ENSMUST00000179817 107 ntBASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm37732-201ENSMUST00000194377 316 ntBASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm42578-201ENSMUST00000199960 194 ntBASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC2.22□□□□□ -2.05
Lima1Q9ERG0 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Gm9762-201ENSMUST00000036976 444 ntBASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Lima1Q9ERG0 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm14125-201ENSMUST00000113442 680 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.21□□□□□ -2.06
Lima1Q9ERG0 Gm13880-201ENSMUST00000118421 474 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms