Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.12□□□□□ -1.91
Scn4aQ9ER60 Gm25496-201ENSMUST00000104430 120 ntBASIC3.12□□□□□ -1.91
Scn4aQ9ER60 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.12□□□□□ -1.91
Scn4aQ9ER60 Gm28404-201ENSMUST00000190242 453 ntBASIC3.12□□□□□ -1.91
Scn4aQ9ER60 Gm37550-201ENSMUST00000193230 463 ntBASIC3.12□□□□□ -1.91
Scn4aQ9ER60 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.12□□□□□ -1.91
Scn4aQ9ER60 Gm45696-201ENSMUST00000212088 985 ntBASIC3.12□□□□□ -1.91
Scn4aQ9ER60 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.12□□□□□ -1.91
Scn4aQ9ER60 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.12□□□□□ -1.91
Scn4aQ9ER60 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.12□□□□□ -1.91
Scn4aQ9ER60 Gm26437-201ENSMUST00000082595 105 ntBASIC3.12□□□□□ -1.91
Scn4aQ9ER60 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Scn4aQ9ER60 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC3.12□□□□□ -1.91
Scn4aQ9ER60 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm14979-201ENSMUST00000121561 1035 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm9785-202ENSMUST00000144563 593 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm24060-201ENSMUST00000157494 95 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm22517-201ENSMUST00000158265 136 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm23005-201ENSMUST00000158950 136 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Mir3968-201ENSMUST00000175355 100 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm24754-201ENSMUST00000177997 107 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm27718-201ENSMUST00000183721 86 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm27163-201ENSMUST00000184767 409 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm5731-201ENSMUST00000190969 481 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm7182-201ENSMUST00000193351 732 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm23347-201ENSMUST00000083823 82 ntBASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Scn4aQ9ER60 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm23431-201ENSMUST00000104006 107 ntBASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm22960-201ENSMUST00000122517 104 ntBASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm22307-201ENSMUST00000180019 107 ntBASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm29299-201ENSMUST00000185609 923 ntBASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm29573-201ENSMUST00000190291 919 ntBASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm19709-201ENSMUST00000215403 482 ntBASIC3.1□□□□□ -1.91
Scn4aQ9ER60 AC163646.2-201ENSMUST00000227962 141 ntBASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Scn4aQ9ER60 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.09□□□□□ -1.91
Scn4aQ9ER60 Gm15854-201ENSMUST00000118879 808 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms