Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm25939-201ENSMUST00000179876 191 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm26622-201ENSMUST00000180520 298 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm27715-201ENSMUST00000184714 260 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Mir7226-201ENSMUST00000184953 60 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm29011-201ENSMUST00000191059 712 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Mir497-201ENSMUST00000200557 84 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm44720-201ENSMUST00000206076 260 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm18410-201ENSMUST00000207199 577 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm45965-201ENSMUST00000221192 1284 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm23444-201ENSMUST00000082922 191 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm25628-201ENSMUST00000084002 105 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Ccdc3Q9D6Y1 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm23951-201ENSMUST00000104029 132 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm14602-201ENSMUST00000118625 340 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm15106-201ENSMUST00000119691 821 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm22960-201ENSMUST00000122517 104 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm23476-201ENSMUST00000158881 274 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm16289-201ENSMUST00000162079 183 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm27161-201ENSMUST00000183960 562 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Mir7009-201ENSMUST00000184519 64 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm37377-201ENSMUST00000191733 304 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm43043-201ENSMUST00000196579 412 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm43626-201ENSMUST00000198575 162 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm26379-202ENSMUST00000200225 132 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm18000-201ENSMUST00000212153 800 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm23249-201ENSMUST00000083369 161 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Mir322-201ENSMUST00000083484 95 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ccdc3Q9D6Y1 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm14731-201ENSMUST00000119216 376 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm15193-201ENSMUST00000120224 865 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm12876-201ENSMUST00000120975 408 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm14129-201ENSMUST00000122436 291 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm4916-201ENSMUST00000126139 642 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm22390-201ENSMUST00000157588 325 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Mir6353-201ENSMUST00000183596 113 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm38214-201ENSMUST00000192581 988 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm37989-201ENSMUST00000195202 803 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm44634-201ENSMUST00000206119 152 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc3Q9D6Y1 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Gm23867-201ENSMUST00000122649 274 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Gm23548-201ENSMUST00000158963 106 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Gm24813-201ENSMUST00000175310 84 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Gm22307-201ENSMUST00000180019 107 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Mir6997-201ENSMUST00000184313 71 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Gm7858-201ENSMUST00000190177 622 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Gm37946-201ENSMUST00000192064 347 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Gm7675-201ENSMUST00000208828 686 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Gm30738-201ENSMUST00000221346 502 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.24□□□□□ -2.05
Ccdc3Q9D6Y1 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 381.3 ms