Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm14020-201ENSMUST00000118165 662 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Gm26148-201ENSMUST00000157430 68 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Gm28267-201ENSMUST00000191093 265 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Mir7682-201ENSMUST00000198467 58 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Gm43604-201ENSMUST00000199799 705 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Gm44726-201ENSMUST00000203427 217 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Gm19786-201ENSMUST00000222589 580 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 AC144628.2-201ENSMUST00000227374 352 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Olfr575-201ENSMUST00000084812 957 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ddx56Q9D0R4 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm12427-201ENSMUST00000117719 302 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm15014-201ENSMUST00000120742 258 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm14841-201ENSMUST00000121067 758 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm24839-201ENSMUST00000122602 107 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm25970-201ENSMUST00000157165 86 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm23228-201ENSMUST00000157296 270 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm23016-201ENSMUST00000158431 62 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm24976-201ENSMUST00000158972 135 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm8114-201ENSMUST00000172225 484 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm9022-202ENSMUST00000183285 483 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm9722-201ENSMUST00000194568 802 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm44099-201ENSMUST00000203299 112 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm18854-201ENSMUST00000211196 329 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm25856-201ENSMUST00000082786 75 ntBASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ddx56Q9D0R4 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm22493-201ENSMUST00000104494 132 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm9119-201ENSMUST00000118866 495 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm13475-201ENSMUST00000119290 234 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm12872-201ENSMUST00000121835 320 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm22816-201ENSMUST00000157450 117 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm24419-201ENSMUST00000157875 332 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm25436-201ENSMUST00000158275 145 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm15914-201ENSMUST00000161922 309 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm20794-201ENSMUST00000177626 628 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm21171-201ENSMUST00000180048 673 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm27535-201ENSMUST00000183814 157 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Mir7093-201ENSMUST00000184195 101 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm8296-201ENSMUST00000185597 524 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm28700-201ENSMUST00000187614 579 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm7449-201ENSMUST00000194393 663 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Ighv1-32-201ENSMUST00000195149 351 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm43559-201ENSMUST00000198755 466 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Olfr1285-201ENSMUST00000208523 903 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 AC167229.1-201ENSMUST00000220057 469 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm24626-201ENSMUST00000082621 161 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Gm22868-201ENSMUST00000083955 164 ntBASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ddx56Q9D0R4 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms