Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm16129-201ENSMUST00000152628 486 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm20534-201ENSMUST00000172957 172 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm24813-201ENSMUST00000175310 84 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm27379-201ENSMUST00000183730 123 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm37213-201ENSMUST00000193077 586 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm43541-201ENSMUST00000197208 581 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm43264-201ENSMUST00000202284 325 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm17893-201ENSMUST00000203017 770 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm44332-201ENSMUST00000203712 433 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm10297-201ENSMUST00000207136 651 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm18729-201ENSMUST00000217230 621 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm2544-201ENSMUST00000222702 756 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm25131-201ENSMUST00000082653 151 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm25008-201ENSMUST00000083809 81 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm25628-201ENSMUST00000084002 105 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Mir465-201ENSMUST00000093563 74 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.51□□□□□ -2.01
Snf8Q9CZ28 Gm23747-201ENSMUST00000104228 131 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm4732-201ENSMUST00000118778 473 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm13862-201ENSMUST00000121220 197 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm24210-201ENSMUST00000158263 133 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm25902-201ENSMUST00000158493 318 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm22947-201ENSMUST00000158559 91 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm4540-201ENSMUST00000170669 429 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm26960-201ENSMUST00000182263 412 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm18692-201ENSMUST00000193047 511 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm43224-201ENSMUST00000201567 898 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm32222-201ENSMUST00000203296 298 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.5□□□□□ -2.01
Snf8Q9CZ28 AC159476.2-201ENSMUST00000216221 418 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Snf8Q9CZ28 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm26128-201ENSMUST00000083170 110 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Snf8Q9CZ28 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm9043-201ENSMUST00000119677 314 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm15719-201ENSMUST00000120619 635 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm12607-201ENSMUST00000120724 493 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm14069-201ENSMUST00000120815 229 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm13913-201ENSMUST00000121126 260 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm14651-201ENSMUST00000147192 442 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm23642-201ENSMUST00000157858 258 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm27220-201ENSMUST00000183453 262 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm28282-201ENSMUST00000186072 186 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm28169-201ENSMUST00000190342 345 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm19498-201ENSMUST00000191128 331 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm5317-201ENSMUST00000204445 847 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm45226-201ENSMUST00000206602 288 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm18252-203ENSMUST00000215855 757 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.49□□□□□ -2.01
Snf8Q9CZ28 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm4017-201ENSMUST00000084813 338 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.49□□□□□ -2.01
Snf8Q9CZ28 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Snf8Q9CZ28 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Snf8Q9CZ28 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Snf8Q9CZ28 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Snf8Q9CZ28 Gm13627-201ENSMUST00000119700 706 ntBASIC2.48□□□□□ -2.01
Snf8Q9CZ28 Gm13502-201ENSMUST00000121574 684 ntBASIC2.48□□□□□ -2.01
Snf8Q9CZ28 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms