Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm43521-201ENSMUST00000197838 255 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm43107-201ENSMUST00000198729 255 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm7422-201ENSMUST00000220115 640 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm2446-201ENSMUST00000220144 772 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Snora23-201ENSMUST00000082517 184 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Smc1aQ9CU62 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Smc1aQ9CU62 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Smc1aQ9CU62 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.15□□□□□ -1.9
Smc1aQ9CU62 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.15□□□□□ -1.9
Smc1aQ9CU62 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Smc1aQ9CU62 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Smc1aQ9CU62 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm22674-201ENSMUST00000104413 131 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm22416-201ENSMUST00000158590 88 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm25119-201ENSMUST00000158815 88 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Mir3103-201ENSMUST00000175474 67 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm20698-201ENSMUST00000175657 233 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Mir6402-201ENSMUST00000183406 80 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Mir6541-201ENSMUST00000183649 110 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm27470-201ENSMUST00000184070 210 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Mir6371-201ENSMUST00000184470 111 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm27330-201ENSMUST00000184689 132 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm28926-201ENSMUST00000191063 680 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm43355-201ENSMUST00000196541 346 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm46193-201ENSMUST00000219399 364 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm23847-201ENSMUST00000083829 110 ntBASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Smc1aQ9CU62 Gm26377-201ENSMUST00000102184 108 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Gm25526-201ENSMUST00000104332 132 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Gm6923-201ENSMUST00000118343 406 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Gm11582-201ENSMUST00000121041 236 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Gm23409-201ENSMUST00000158516 237 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Gm17119-201ENSMUST00000163943 280 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Gm29641-201ENSMUST00000188955 259 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.14□□□□□ -1.91
Smc1aQ9CU62 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Gm44688-201ENSMUST00000209083 537 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Gm45439-201ENSMUST00000211723 359 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Smc1aQ9CU62 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC3.14□□□□□ -1.91
Smc1aQ9CU62 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Smc1aQ9CU62 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
Smc1aQ9CU62 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm23911-201ENSMUST00000104596 134 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm13085-201ENSMUST00000118356 171 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm13640-201ENSMUST00000118445 264 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm12238-201ENSMUST00000127764 124 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm22141-201ENSMUST00000157403 277 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm23895-201ENSMUST00000158108 160 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm22858-201ENSMUST00000174972 76 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm22853-201ENSMUST00000174974 131 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm29658-201ENSMUST00000185404 230 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm29597-201ENSMUST00000188035 308 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm28647-201ENSMUST00000188416 197 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm9696-202ENSMUST00000191541 830 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 AC168880.1-201ENSMUST00000225113 707 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm44679-201ENSMUST00000207202 2908 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.13□□□□□ -1.91
Smc1aQ9CU62 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Smc1aQ9CU62 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Smc1aQ9CU62 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Smc1aQ9CU62 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.12□□□□□ -1.91
Smc1aQ9CU62 Gm12636-201ENSMUST00000117395 624 ntBASIC3.12□□□□□ -1.91
Smc1aQ9CU62 Gm14751-201ENSMUST00000117693 222 ntBASIC3.12□□□□□ -1.91
Smc1aQ9CU62 Gm14918-201ENSMUST00000118153 268 ntBASIC3.12□□□□□ -1.91
Smc1aQ9CU62 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.12□□□□□ -1.91
Smc1aQ9CU62 Gm16412-201ENSMUST00000121602 273 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms