Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm6071-201ENSMUST00000119561 440 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm11556-201ENSMUST00000120751 288 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm11384-201ENSMUST00000121376 303 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm22141-201ENSMUST00000157403 277 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm25637-201ENSMUST00000157529 107 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm23559-201ENSMUST00000157824 103 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm23223-201ENSMUST00000158119 127 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm23387-201ENSMUST00000158586 107 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm17162-201ENSMUST00000168538 473 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm26195-201ENSMUST00000175035 101 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Mir6363-201ENSMUST00000184880 114 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.43□□□□□ -2.02
Use1Q9CQ56 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm43217-201ENSMUST00000199513 367 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm34314-201ENSMUST00000203622 367 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm43992-201ENSMUST00000204358 197 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm7753-201ENSMUST00000221007 867 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.43□□□□□ -2.02
Use1Q9CQ56 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Use1Q9CQ56 Mir323-201ENSMUST00000083683 86 ntBASIC2.43□□□□□ -2.02
Use1Q9CQ56 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Use1Q9CQ56 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Use1Q9CQ56 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.42□□□□□ -2.02
Use1Q9CQ56 Gm25539-201ENSMUST00000116886 122 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Gm14073-201ENSMUST00000117344 381 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Gm6923-201ENSMUST00000118343 406 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Gm13627-201ENSMUST00000119700 706 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Gm5287-201ENSMUST00000120666 598 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.42□□□□□ -2.02
Use1Q9CQ56 Gm25283-201ENSMUST00000157272 77 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Gm16232-201ENSMUST00000162856 167 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Gm22131-201ENSMUST00000178415 94 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Gm17946-201ENSMUST00000186856 538 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Gm45439-201ENSMUST00000211723 359 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.42□□□□□ -2.02
Use1Q9CQ56 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
Use1Q9CQ56 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Use1Q9CQ56 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.41□□□□□ -2.02
Use1Q9CQ56 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Use1Q9CQ56 Gm14815-201ENSMUST00000120060 488 ntBASIC2.41□□□□□ -2.02
Use1Q9CQ56 Gm14867-201ENSMUST00000120156 866 ntBASIC2.41□□□□□ -2.02
Use1Q9CQ56 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Use1Q9CQ56 Gm17187-201ENSMUST00000164622 410 ntBASIC2.41□□□□□ -2.02
Use1Q9CQ56 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Use1Q9CQ56 Gm29184-201ENSMUST00000190038 334 ntBASIC2.41□□□□□ -2.02
Use1Q9CQ56 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.41□□□□□ -2.02
Use1Q9CQ56 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Use1Q9CQ56 Gm45678-201ENSMUST00000210509 295 ntBASIC2.41□□□□□ -2.02
Use1Q9CQ56 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.41□□□□□ -2.02
Use1Q9CQ56 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.41□□□□□ -2.02
Use1Q9CQ56 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.41□□□□□ -2.02
Use1Q9CQ56 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Use1Q9CQ56 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.41□□□□□ -2.02
Use1Q9CQ56 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.41□□□□□ -2.02
Use1Q9CQ56 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Use1Q9CQ56 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.41□□□□□ -2.02
Use1Q9CQ56 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Use1Q9CQ56 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Use1Q9CQ56 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Use1Q9CQ56 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm23128-201ENSMUST00000104257 132 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm15103-201ENSMUST00000119893 871 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Mup-ps1-201ENSMUST00000120720 544 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm15223-201ENSMUST00000120989 826 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm15466-201ENSMUST00000122299 333 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm26275-201ENSMUST00000157101 268 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm3470-201ENSMUST00000160819 420 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm28113-201ENSMUST00000188280 229 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm38281-201ENSMUST00000192301 315 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm38214-201ENSMUST00000192581 988 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm37037-201ENSMUST00000194475 424 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm37987-201ENSMUST00000194999 825 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm23128-202ENSMUST00000196578 133 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm43669-201ENSMUST00000198229 436 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC2.4□□□□□ -2.03
Use1Q9CQ56 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm18252-203ENSMUST00000215855 757 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.4□□□□□ -2.03
Use1Q9CQ56 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.4□□□□□ -2.03
Use1Q9CQ56 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Use1Q9CQ56 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Use1Q9CQ56 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms