Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mir6382-201ENSMUST00000184055 110 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Gm8151-201ENSMUST00000184817 871 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Gm19694-201ENSMUST00000192364 505 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Gm42818-201ENSMUST00000198869 987 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Gm45588-201ENSMUST00000211213 630 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Gm19563-201ENSMUST00000222031 270 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Gm2710-201ENSMUST00000073196 603 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Rny3-201ENSMUST00000083011 102 ntBASIC3.03□□□□□ -1.92
Ccdc28bQ8CEG5 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Mir599-201ENSMUST00000102378 88 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm22493-201ENSMUST00000104494 132 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm14880-201ENSMUST00000117581 292 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm12492-201ENSMUST00000117665 564 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm13273-201ENSMUST00000119737 159 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm14159-201ENSMUST00000119832 451 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm26348-201ENSMUST00000157528 240 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm23473-201ENSMUST00000158883 116 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm17538-201ENSMUST00000168236 327 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm1833-201ENSMUST00000191608 682 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm38076-201ENSMUST00000193889 450 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm43007-201ENSMUST00000197618 291 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm43578-201ENSMUST00000201250 459 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm34783-201ENSMUST00000209159 303 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm19219-201ENSMUST00000215863 724 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm17890-201ENSMUST00000221419 757 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 AC159619.2-201ENSMUST00000222924 401 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm9309-201ENSMUST00000223537 546 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 AC158981.3-202ENSMUST00000228906 523 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm22229-201ENSMUST00000082987 108 ntBASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc28bQ8CEG5 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm23744-201ENSMUST00000104231 149 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm25848-201ENSMUST00000116790 144 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm7123-201ENSMUST00000117647 213 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm14918-201ENSMUST00000118153 268 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm12042-201ENSMUST00000120479 301 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm12368-201ENSMUST00000122251 434 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm23463-201ENSMUST00000122468 99 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm22853-201ENSMUST00000174974 131 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm26061-201ENSMUST00000175584 108 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm7909-201ENSMUST00000182688 614 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm37869-201ENSMUST00000193385 595 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm37417-201ENSMUST00000195257 454 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm44295-201ENSMUST00000203805 437 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm45539-201ENSMUST00000210313 428 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Gm29809-201ENSMUST00000218423 493 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 AC192333.2-201ENSMUST00000224771 196 ntBASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc28bQ8CEG5 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms