Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 AC154245.1-201ENSMUST00000224615 601 ntBASIC3.47□□□□□ -1.85
Atg4aQ8C9S8 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.47□□□□□ -1.85
Atg4aQ8C9S8 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Atg4aQ8C9S8 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Atg4aQ8C9S8 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Atg4aQ8C9S8 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Atg4aQ8C9S8 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Atg4aQ8C9S8 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Atg4aQ8C9S8 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm12294-201ENSMUST00000119723 490 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm13273-201ENSMUST00000119737 159 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm14578-201ENSMUST00000122166 391 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 DQ267100-201ENSMUST00000122600 72 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm25559-201ENSMUST00000157182 74 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm26348-201ENSMUST00000157528 240 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm23895-201ENSMUST00000158108 160 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm24968-201ENSMUST00000179817 107 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm23186-201ENSMUST00000180078 107 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Mir6382-201ENSMUST00000184055 110 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm29647-201ENSMUST00000188795 666 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm28504-201ENSMUST00000190977 666 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm35843-201ENSMUST00000193716 666 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm34091-201ENSMUST00000200875 604 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm44923-201ENSMUST00000206673 85 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm45173-201ENSMUST00000206819 305 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 AF357341-201ENSMUST00000083088 75 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Mir19a-201ENSMUST00000083482 82 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Atg4aQ8C9S8 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 BC051076-202ENSMUST00000199477 2868 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm24982-201ENSMUST00000104456 132 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm11367-201ENSMUST00000117802 120 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm13574-201ENSMUST00000120482 394 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm22141-201ENSMUST00000157403 277 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm17187-201ENSMUST00000164622 410 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm28283-201ENSMUST00000185509 178 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm9068-201ENSMUST00000217393 455 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm17890-201ENSMUST00000221419 757 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm23615-201ENSMUST00000082602 65 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Atg4aQ8C9S8 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm13082-201ENSMUST00000118877 561 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm14366-201ENSMUST00000121970 730 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm14129-201ENSMUST00000122436 291 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm25294-201ENSMUST00000122791 104 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm26277-201ENSMUST00000157097 152 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm7582-201ENSMUST00000160831 603 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm22716-201ENSMUST00000177596 107 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm7094-201ENSMUST00000178379 366 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm26960-201ENSMUST00000182263 412 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm27718-201ENSMUST00000183721 86 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm43541-201ENSMUST00000197208 581 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm44720-201ENSMUST00000206076 260 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 AC147101.1-201ENSMUST00000217964 312 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Gm18774-201ENSMUST00000218269 601 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Atg4aQ8C9S8 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms