Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC2.58□□□□□ -2
Usp47Q8BY87 Gm9251-201ENSMUST00000197202 628 ntBASIC2.58□□□□□ -2
Usp47Q8BY87 Gm43676-201ENSMUST00000197532 540 ntBASIC2.58□□□□□ -2
Usp47Q8BY87 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC2.58□□□□□ -2
Usp47Q8BY87 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC2.58□□□□□ -2
Usp47Q8BY87 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.58□□□□□ -2
Usp47Q8BY87 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.58□□□□□ -2
Usp47Q8BY87 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.58□□□□□ -2
Usp47Q8BY87 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Usp47Q8BY87 Mir301b-201ENSMUST00000102333 97 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.57□□□□□ -2
Usp47Q8BY87 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Gm12697-201ENSMUST00000118008 667 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Usp47Q8BY87 Gm16100-201ENSMUST00000120489 231 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Gm14841-201ENSMUST00000121067 758 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Gm16458-201ENSMUST00000121428 502 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Gm22521-201ENSMUST00000158272 134 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Gm23714-201ENSMUST00000179259 105 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.57□□□□□ -2
Usp47Q8BY87 Gm44881-201ENSMUST00000205425 367 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.57□□□□□ -2
Usp47Q8BY87 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.57□□□□□ -2
Usp47Q8BY87 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Gm23975-201ENSMUST00000082685 106 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Gm24044-201ENSMUST00000083107 156 ntBASIC2.57□□□□□ -2
Usp47Q8BY87 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Usp47Q8BY87 Gm11430-201ENSMUST00000121317 217 ntBASIC2.56□□□□□ -2
Usp47Q8BY87 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Usp47Q8BY87 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Usp47Q8BY87 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC2.56□□□□□ -2
Usp47Q8BY87 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.56□□□□□ -2
Usp47Q8BY87 Gm43765-201ENSMUST00000196303 893 ntBASIC2.56□□□□□ -2
Usp47Q8BY87 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.56□□□□□ -2
Usp47Q8BY87 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.56□□□□□ -2
Usp47Q8BY87 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.56□□□□□ -2
Usp47Q8BY87 Gm45273-201ENSMUST00000211559 281 ntBASIC2.56□□□□□ -2
Usp47Q8BY87 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.56□□□□□ -2
Usp47Q8BY87 Gm46194-201ENSMUST00000218136 320 ntBASIC2.56□□□□□ -2
Usp47Q8BY87 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.56□□□□□ -2
Usp47Q8BY87 AC139294.2-201ENSMUST00000227159 285 ntBASIC2.56□□□□□ -2
Usp47Q8BY87 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Usp47Q8BY87 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC2.56□□□□□ -2
Usp47Q8BY87 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Usp47Q8BY87 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Usp47Q8BY87 Gm15159-201ENSMUST00000117062 764 ntBASIC2.55□□□□□ -2
Usp47Q8BY87 Gm11693-201ENSMUST00000119625 565 ntBASIC2.55□□□□□ -2
Usp47Q8BY87 Gm15106-201ENSMUST00000119691 821 ntBASIC2.55□□□□□ -2
Usp47Q8BY87 Gm6591-201ENSMUST00000121063 434 ntBASIC2.55□□□□□ -2
Usp47Q8BY87 Gm11438-201ENSMUST00000121582 189 ntBASIC2.55□□□□□ -2
Usp47Q8BY87 Gm37817-201ENSMUST00000195276 434 ntBASIC2.55□□□□□ -2
Usp47Q8BY87 Gm44348-201ENSMUST00000200165 122 ntBASIC2.55□□□□□ -2
Usp47Q8BY87 Gm20304-201ENSMUST00000218168 444 ntBASIC2.55□□□□□ -2
Usp47Q8BY87 Gm22444-201ENSMUST00000093693 108 ntBASIC2.55□□□□□ -2
Usp47Q8BY87 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Usp47Q8BY87 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Usp47Q8BY87 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Usp47Q8BY87 Mir804-201ENSMUST00000103251 95 ntBASIC2.54□□□□□ -2
Usp47Q8BY87 Gm25832-201ENSMUST00000104140 130 ntBASIC2.54□□□□□ -2
Usp47Q8BY87 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.54□□□□□ -2
Usp47Q8BY87 Gm7123-201ENSMUST00000117647 213 ntBASIC2.54□□□□□ -2
Usp47Q8BY87 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Usp47Q8BY87 Gm22554-201ENSMUST00000157798 147 ntBASIC2.54□□□□□ -2
Usp47Q8BY87 Gm23312-201ENSMUST00000158774 102 ntBASIC2.54□□□□□ -2
Usp47Q8BY87 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.54□□□□□ -2
Usp47Q8BY87 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.54□□□□□ -2
Usp47Q8BY87 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.54□□□□□ -2
Usp47Q8BY87 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Usp47Q8BY87 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.54□□□□□ -2
Usp47Q8BY87 CT025552.1-201ENSMUST00000224561 521 ntBASIC2.54□□□□□ -2
Usp47Q8BY87 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Usp47Q8BY87 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC2.54□□□□□ -2
Usp47Q8BY87 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Usp47Q8BY87 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Usp47Q8BY87 Gm12137-201ENSMUST00000119565 346 ntBASIC2.53□□□□□ -2
Usp47Q8BY87 Gm9541-201ENSMUST00000188409 502 ntBASIC2.53□□□□□ -2
Usp47Q8BY87 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.53□□□□□ -2
Usp47Q8BY87 Gm43489-201ENSMUST00000196810 993 ntBASIC2.53□□□□□ -2
Usp47Q8BY87 Gm42516-201ENSMUST00000198691 767 ntBASIC2.53□□□□□ -2
Usp47Q8BY87 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.53□□□□□ -2
Usp47Q8BY87 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.53□□□□□ -2
Usp47Q8BY87 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
Usp47Q8BY87 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.53□□□□□ -2
Usp47Q8BY87 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Usp47Q8BY87 Gm11367-201ENSMUST00000117802 120 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 Gm14793-201ENSMUST00000118739 311 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 Gm23958-201ENSMUST00000157207 105 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Usp47Q8BY87 Gm24656-201ENSMUST00000177548 132 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Usp47Q8BY87 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Usp47Q8BY87 Mir7021-201ENSMUST00000197026 63 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 Gm15235-201ENSMUST00000200572 194 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 Gm45316-201ENSMUST00000210128 162 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usp47Q8BY87 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.52□□□□□ -2.01
Usp47Q8BY87 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms