Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC120553.1-201ENSMUST00000227313 260 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 AC098719.1-201ENSMUST00000228920 371 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm25630-201ENSMUST00000084000 162 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Svet1-201ENSMUST00000209370 3940 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.03□□□□□ -1.6
Usp40Q8BWR4 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm14355-201ENSMUST00000117352 264 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm12276-201ENSMUST00000121709 301 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm14333-201ENSMUST00000130484 264 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm28785-201ENSMUST00000187478 379 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm29192-201ENSMUST00000190942 377 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm28314-201ENSMUST00000191276 345 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm37698-201ENSMUST00000192605 463 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm2189-201ENSMUST00000201419 429 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm45395-201ENSMUST00000209891 559 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 AC144819.1-201ENSMUST00000227015 620 ntBASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Usp40Q8BWR4 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm38207-201ENSMUST00000193009 3505 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Usp40Q8BWR4 AC164297.1-201ENSMUST00000224484 1561 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm12137-201ENSMUST00000119565 346 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm8244-201ENSMUST00000121254 264 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm24402-201ENSMUST00000157873 91 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm23855-201ENSMUST00000158377 135 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm24001-201ENSMUST00000158463 85 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm28591-201ENSMUST00000185259 183 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm19193-201ENSMUST00000190263 590 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm44336-201ENSMUST00000203696 468 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 AC158606.1-201ENSMUST00000220078 325 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm3086-202ENSMUST00000221248 310 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm25792-201ENSMUST00000083289 100 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm22739-201ENSMUST00000083437 160 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Gm43881-201ENSMUST00000203051 2530 ntBASIC5.01□□□□□ -1.61
Usp40Q8BWR4 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm42537-201ENSMUST00000198260 2574 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Usp40Q8BWR4 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm25097-201ENSMUST00000104042 145 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm13122-201ENSMUST00000118380 453 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm14013-201ENSMUST00000119006 270 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm14765-201ENSMUST00000121954 326 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC5□□□□□ -1.61
Usp40Q8BWR4 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm23169-201ENSMUST00000157157 112 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm26102-201ENSMUST00000157251 284 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm22890-201ENSMUST00000158642 144 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm8161-201ENSMUST00000168739 481 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm9830-201ENSMUST00000178509 357 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm27585-201ENSMUST00000183717 199 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm29397-201ENSMUST00000185205 333 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm3010-201ENSMUST00000198805 448 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC5□□□□□ -1.61
Usp40Q8BWR4 CT010455.1-201ENSMUST00000218579 413 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC5□□□□□ -1.61
Usp40Q8BWR4 AC122924.2-201ENSMUST00000220799 298 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 AC165157.3-201ENSMUST00000220815 103 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 CT009711.3-201ENSMUST00000225882 250 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm22973-201ENSMUST00000083298 191 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 Gm44679-201ENSMUST00000207202 2908 ntBASIC5□□□□□ -1.61
Usp40Q8BWR4 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC5□□□□□ -1.61
Usp40Q8BWR4 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Usp40Q8BWR4 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Usp40Q8BWR4 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm15088-201ENSMUST00000117973 1508 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm15098-201ENSMUST00000119036 1508 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm9157-201ENSMUST00000117673 225 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm11923-201ENSMUST00000118135 508 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm14838-201ENSMUST00000118913 248 ntBASIC4.99□□□□□ -1.61
Usp40Q8BWR4 Gm11556-201ENSMUST00000120751 288 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms