Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm23089-201ENSMUST00000178947 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm24153-201ENSMUST00000179280 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm25597-201ENSMUST00000179388 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm25816-201ENSMUST00000179764 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm26189-201ENSMUST00000179879 107 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm26188-201ENSMUST00000179963 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm26433-201ENSMUST00000180227 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm22128-201ENSMUST00000180346 94 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm27330-201ENSMUST00000184689 132 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm19891-201ENSMUST00000189771 303 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm45173-201ENSMUST00000206819 305 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm45860-201ENSMUST00000212700 334 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm46136-201ENSMUST00000214730 565 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
Ccdc40Q8BI79 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm24126-201ENSMUST00000104111 106 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm22486-201ENSMUST00000116815 137 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm15106-201ENSMUST00000119691 821 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm23325-201ENSMUST00000157422 129 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm22131-201ENSMUST00000178415 94 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm37568-201ENSMUST00000191755 364 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm43217-201ENSMUST00000199513 367 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Gm43026-201ENSMUST00000202972 325 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ccdc40Q8BI79 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Gm13504-201ENSMUST00000117490 316 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Gm14736-201ENSMUST00000121470 336 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Gm17065-201ENSMUST00000165245 239 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Gm26177-201ENSMUST00000178683 107 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Gm5224-201ENSMUST00000183060 350 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Mir703-201ENSMUST00000197105 109 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Gm44688-201ENSMUST00000209083 537 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 AC164629.1-201ENSMUST00000220250 1113 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Ccdc40Q8BI79 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Mir706-201ENSMUST00000102262 84 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm9440-201ENSMUST00000119667 539 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm14815-201ENSMUST00000120060 488 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm14694-201ENSMUST00000121856 282 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm25334-201ENSMUST00000158036 110 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm25224-201ENSMUST00000158195 68 ntBASIC2.93□□□□□ -1.94
Ccdc40Q8BI79 Gm18520-201ENSMUST00000174783 658 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms