Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm11430-201ENSMUST00000121317 217 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm25153-201ENSMUST00000157118 156 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm22651-201ENSMUST00000157872 94 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm23223-201ENSMUST00000158119 127 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm22538-201ENSMUST00000158169 299 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm20718-201ENSMUST00000176058 259 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm27342-201ENSMUST00000183530 109 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Mir6363-201ENSMUST00000184880 114 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm27249-201ENSMUST00000185049 328 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm29045-201ENSMUST00000187278 698 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm6060-201ENSMUST00000188671 251 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm29747-201ENSMUST00000194764 585 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Mir3069-201ENSMUST00000198802 65 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm19457-201ENSMUST00000200995 448 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm23102-201ENSMUST00000083724 116 ntBASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Clrn3Q8BHH8 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm23747-201ENSMUST00000104228 131 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm14669-201ENSMUST00000118841 250 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm14238-201ENSMUST00000120227 323 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm14240-201ENSMUST00000120353 546 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm15466-201ENSMUST00000122299 333 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm13194-201ENSMUST00000142299 311 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm26101-201ENSMUST00000157246 105 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm22947-201ENSMUST00000158559 91 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Mir5129-201ENSMUST00000174938 78 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm23190-201ENSMUST00000180307 64 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm8392-201ENSMUST00000185647 835 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm29288-201ENSMUST00000191582 901 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm44393-201ENSMUST00000197418 138 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm43493-201ENSMUST00000199837 202 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm32222-201ENSMUST00000203296 298 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm45678-201ENSMUST00000210509 295 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Clrn3Q8BHH8 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm11268-201ENSMUST00000118347 267 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm16021-201ENSMUST00000121176 219 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Mup-ps15-201ENSMUST00000121741 539 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm14363-201ENSMUST00000122304 409 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm23754-201ENSMUST00000157576 63 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm23387-201ENSMUST00000158586 107 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm16232-201ENSMUST00000162856 167 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Mir6541-201ENSMUST00000183649 110 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm28439-201ENSMUST00000187714 876 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm20915-201ENSMUST00000191575 663 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Mir7232-201ENSMUST00000197929 74 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm43626-201ENSMUST00000198575 162 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm18414-201ENSMUST00000210858 694 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm45439-201ENSMUST00000211723 359 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.37□□□□□ -2.03
Clrn3Q8BHH8 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.36□□□□□ -2.03
Clrn3Q8BHH8 Mir682-201ENSMUST00000102281 96 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms