Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.64□□□□□ -1.99
Rpap1Q80TE0 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.64□□□□□ -1.99
Rpap1Q80TE0 Gm44609-201ENSMUST00000207157 460 ntBASIC2.64□□□□□ -1.99
Rpap1Q80TE0 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Rpap1Q80TE0 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.64□□□□□ -1.99
Rpap1Q80TE0 Mir30d-201ENSMUST00000083503 82 ntBASIC2.64□□□□□ -1.99
Rpap1Q80TE0 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Rpap1Q80TE0 Gm26082-201ENSMUST00000104070 127 ntBASIC2.63□□□□□ -1.99
Rpap1Q80TE0 Gm14163-201ENSMUST00000117342 217 ntBASIC2.63□□□□□ -1.99
Rpap1Q80TE0 Gm16331-201ENSMUST00000144274 498 ntBASIC2.63□□□□□ -1.99
Rpap1Q80TE0 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Rpap1Q80TE0 Mir6238-201ENSMUST00000184140 129 ntBASIC2.63□□□□□ -1.99
Rpap1Q80TE0 Gm18406-201ENSMUST00000185872 669 ntBASIC2.63□□□□□ -1.99
Rpap1Q80TE0 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.63□□□□□ -1.99
Rpap1Q80TE0 Gm42465-201ENSMUST00000197036 492 ntBASIC2.63□□□□□ -1.99
Rpap1Q80TE0 Gm7984-201ENSMUST00000060640 538 ntBASIC2.63□□□□□ -1.99
Rpap1Q80TE0 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Rpap1Q80TE0 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.63□□□□□ -1.99
Rpap1Q80TE0 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Rpap1Q80TE0 Gm22673-201ENSMUST00000104415 131 ntBASIC2.62□□□□□ -1.99
Rpap1Q80TE0 Gm14786-201ENSMUST00000117127 944 ntBASIC2.62□□□□□ -1.99
Rpap1Q80TE0 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.62□□□□□ -1.99
Rpap1Q80TE0 Gm18354-201ENSMUST00000173515 1068 ntBASIC2.62□□□□□ -1.99
Rpap1Q80TE0 Mir3968-201ENSMUST00000175355 100 ntBASIC2.62□□□□□ -1.99
Rpap1Q80TE0 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.62□□□□□ -1.99
Rpap1Q80TE0 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.62□□□□□ -1.99
Rpap1Q80TE0 Gm44266-201ENSMUST00000205235 500 ntBASIC2.62□□□□□ -1.99
Rpap1Q80TE0 Gm9628-201ENSMUST00000222169 725 ntBASIC2.62□□□□□ -1.99
Rpap1Q80TE0 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.62□□□□□ -1.99
Rpap1Q80TE0 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Rpap1Q80TE0 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.62□□□□□ -1.99
Rpap1Q80TE0 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
Rpap1Q80TE0 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Rpap1Q80TE0 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.61□□□□□ -1.99
Rpap1Q80TE0 Gm8121-201ENSMUST00000153583 499 ntBASIC2.61□□□□□ -1.99
Rpap1Q80TE0 Gm24572-201ENSMUST00000175505 88 ntBASIC2.61□□□□□ -1.99
Rpap1Q80TE0 Gm25198-201ENSMUST00000178574 110 ntBASIC2.61□□□□□ -1.99
Rpap1Q80TE0 Gm20915-201ENSMUST00000191575 663 ntBASIC2.61□□□□□ -1.99
Rpap1Q80TE0 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Rpap1Q80TE0 Gm3010-201ENSMUST00000198805 448 ntBASIC2.61□□□□□ -1.99
Rpap1Q80TE0 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.61□□□□□ -1.99
Rpap1Q80TE0 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.61□□□□□ -1.99
Rpap1Q80TE0 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Rpap1Q80TE0 Gm24984-201ENSMUST00000104454 133 ntBASIC2.6□□□□□ -1.99
Rpap1Q80TE0 Gm22563-201ENSMUST00000157333 269 ntBASIC2.6□□□□□ -1.99
Rpap1Q80TE0 Gm22665-201ENSMUST00000158720 275 ntBASIC2.6□□□□□ -1.99
Rpap1Q80TE0 Gm28383-201ENSMUST00000187563 139 ntBASIC2.6□□□□□ -1.99
Rpap1Q80TE0 Gm29262-201ENSMUST00000190084 196 ntBASIC2.6□□□□□ -1.99
Rpap1Q80TE0 Gm37281-201ENSMUST00000192412 439 ntBASIC2.6□□□□□ -1.99
Rpap1Q80TE0 AL662807.1-201ENSMUST00000224183 126 ntBASIC2.6□□□□□ -1.99
Rpap1Q80TE0 Gm14771-201ENSMUST00000118249 203 ntBASIC2.59□□□□□ -1.99
Rpap1Q80TE0 Gm5937-201ENSMUST00000119715 643 ntBASIC2.59□□□□□ -1.99
Rpap1Q80TE0 Gm8988-201ENSMUST00000155015 1240 ntBASIC2.59□□□□□ -1.99
Rpap1Q80TE0 Gm25432-201ENSMUST00000158284 66 ntBASIC2.59□□□□□ -1.99
Rpap1Q80TE0 Gm23813-201ENSMUST00000175153 77 ntBASIC2.59□□□□□ -1.99
Rpap1Q80TE0 Gm27025-201ENSMUST00000182392 942 ntBASIC2.59□□□□□ -1.99
Rpap1Q80TE0 Mir6379-201ENSMUST00000183392 115 ntBASIC2.59□□□□□ -1.99
Rpap1Q80TE0 Mir6393-201ENSMUST00000183709 94 ntBASIC2.59□□□□□ -1.99
Rpap1Q80TE0 Gm42474-201ENSMUST00000201073 505 ntBASIC2.59□□□□□ -1.99
Rpap1Q80TE0 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.59□□□□□ -1.99
Rpap1Q80TE0 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.59□□□□□ -1.99
Rpap1Q80TE0 CT030254.3-201ENSMUST00000225959 1231 ntBASIC2.59□□□□□ -1.99
Rpap1Q80TE0 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
Rpap1Q80TE0 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Rpap1Q80TE0 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.59□□□□□ -2
Rpap1Q80TE0 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.59□□□□□ -2
Rpap1Q80TE0 Gm9022-202ENSMUST00000183285 483 ntBASIC2.59□□□□□ -2
Rpap1Q80TE0 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC2.59□□□□□ -2
Rpap1Q80TE0 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.59□□□□□ -2
Rpap1Q80TE0 AC122465.3-201ENSMUST00000221644 355 ntBASIC2.59□□□□□ -2
Rpap1Q80TE0 CT030166.1-201ENSMUST00000222654 357 ntBASIC2.59□□□□□ -2
Rpap1Q80TE0 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.59□□□□□ -2
Rpap1Q80TE0 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.59□□□□□ -2
Rpap1Q80TE0 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC2.59□□□□□ -2
Rpap1Q80TE0 Snord14d-201ENSMUST00000083424 86 ntBASIC2.59□□□□□ -2
Rpap1Q80TE0 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Rpap1Q80TE0 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Rpap1Q80TE0 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Rpap1Q80TE0 Gm6461-201ENSMUST00000120015 633 ntBASIC2.58□□□□□ -2
Rpap1Q80TE0 Gm7909-201ENSMUST00000182688 614 ntBASIC2.58□□□□□ -2
Rpap1Q80TE0 Gm29815-201ENSMUST00000202418 178 ntBASIC2.58□□□□□ -2
Rpap1Q80TE0 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.58□□□□□ -2
Rpap1Q80TE0 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.58□□□□□ -2
Rpap1Q80TE0 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.58□□□□□ -2
Rpap1Q80TE0 Gm23455-201ENSMUST00000083331 100 ntBASIC2.58□□□□□ -2
Rpap1Q80TE0 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC2.58□□□□□ -2
Rpap1Q80TE0 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Rpap1Q80TE0 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Rpap1Q80TE0 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Rpap1Q80TE0 Gm25274-201ENSMUST00000104296 135 ntBASIC2.57□□□□□ -2
Rpap1Q80TE0 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC2.57□□□□□ -2
Rpap1Q80TE0 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC2.57□□□□□ -2
Rpap1Q80TE0 Gm28200-201ENSMUST00000187778 315 ntBASIC2.57□□□□□ -2
Rpap1Q80TE0 Gm29378-201ENSMUST00000188723 315 ntBASIC2.57□□□□□ -2
Rpap1Q80TE0 Gm28909-201ENSMUST00000189406 315 ntBASIC2.57□□□□□ -2
Rpap1Q80TE0 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.57□□□□□ -2
Rpap1Q80TE0 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.57□□□□□ -2
Rpap1Q80TE0 AC117656.3-204ENSMUST00000225656 859 ntBASIC2.57□□□□□ -2
Rpap1Q80TE0 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.57□□□□□ -2
Rpap1Q80TE0 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms