Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Gm23523-201ENSMUST00000180190 107 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Gm28920-201ENSMUST00000189957 699 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Gm36964-201ENSMUST00000191876 198 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Gm19244-201ENSMUST00000204340 253 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Gm45252-201ENSMUST00000211579 397 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Gm7692-201ENSMUST00000213534 409 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.61□□□□□ -1.83
Ubfd1Q78JW9 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm14816-201ENSMUST00000117174 294 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm14647-201ENSMUST00000119392 680 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm15167-201ENSMUST00000121997 187 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm8840-201ENSMUST00000122454 386 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm25572-201ENSMUST00000157527 172 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm25909-201ENSMUST00000157619 121 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm24780-201ENSMUST00000157635 143 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm24853-201ENSMUST00000158026 121 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm22890-201ENSMUST00000158642 144 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm20399-201ENSMUST00000174652 132 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm27903-201ENSMUST00000175482 126 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm28010-201ENSMUST00000179485 126 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm19620-201ENSMUST00000195972 434 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm44355-201ENSMUST00000200417 104 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm18854-201ENSMUST00000211196 329 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm25411-201ENSMUST00000083760 151 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Mir452-201ENSMUST00000093629 85 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Olfr895-201ENSMUST00000093864 951 ntBASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Ubfd1Q78JW9 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Gm12872-201ENSMUST00000121835 320 ntBASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Gm14564-201ENSMUST00000122159 294 ntBASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Gm27245-201ENSMUST00000184385 376 ntBASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Gm28141-201ENSMUST00000186676 342 ntBASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Gm38050-201ENSMUST00000191904 238 ntBASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Gm20102-201ENSMUST00000222445 220 ntBASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ubfd1Q78JW9 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Ubfd1Q78JW9 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Ubfd1Q78JW9 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Ubfd1Q78JW9 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Ubfd1Q78JW9 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms