Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm22784-201ENSMUST00000104088 132 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm13457-201ENSMUST00000117885 267 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm15206-201ENSMUST00000119143 454 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm11366-201ENSMUST00000119279 429 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm15029-201ENSMUST00000119742 199 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm25914-201ENSMUST00000157618 153 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm26373-201ENSMUST00000157833 103 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm22113-201ENSMUST00000158343 104 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Scarna6-201ENSMUST00000158656 265 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm20542-201ENSMUST00000174582 372 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm22355-201ENSMUST00000175531 96 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm24520-201ENSMUST00000179510 110 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Mir6971-201ENSMUST00000183497 63 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 AC188459.1-201ENSMUST00000216651 300 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 AC154994.1-201ENSMUST00000217395 302 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Gm26204-201ENSMUST00000082906 107 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Mir202-201ENSMUST00000083568 72 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cpsf6Q6NVF9 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm23014-201ENSMUST00000104144 130 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm22899-201ENSMUST00000104540 131 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm12797-201ENSMUST00000118645 273 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm6829-201ENSMUST00000119858 360 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm14770-201ENSMUST00000122197 312 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm22968-201ENSMUST00000157955 118 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm24264-201ENSMUST00000179835 94 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm6651-201ENSMUST00000189471 271 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm43284-201ENSMUST00000200103 253 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm45315-201ENSMUST00000209283 333 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm19096-201ENSMUST00000209705 766 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm25815-201ENSMUST00000082755 107 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm26055-201ENSMUST00000083038 107 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.28□□□□□ -1.72
Cpsf6Q6NVF9 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm650-201ENSMUST00000144428 1551 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Mir690-201ENSMUST00000102110 109 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm15151-201ENSMUST00000117106 177 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm12685-201ENSMUST00000121702 214 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm26022-201ENSMUST00000158663 108 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Mir3058-201ENSMUST00000175126 91 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Mir7020-201ENSMUST00000183787 70 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm5329-201ENSMUST00000186898 463 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm29597-201ENSMUST00000188035 308 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm43250-201ENSMUST00000196536 273 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm43304-201ENSMUST00000196803 326 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm45499-201ENSMUST00000211656 280 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm25078-201ENSMUST00000082530 107 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Snord82-201ENSMUST00000082889 70 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm23041-201ENSMUST00000083868 106 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cpsf6Q6NVF9 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cpsf6Q6NVF9 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.26□□□□□ -1.73
Cpsf6Q6NVF9 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.26□□□□□ -1.73
Cpsf6Q6NVF9 Mir701-201ENSMUST00000102208 109 ntBASIC4.26□□□□□ -1.73
Cpsf6Q6NVF9 Mir147-201ENSMUST00000102354 79 ntBASIC4.26□□□□□ -1.73
Cpsf6Q6NVF9 Gm14803-201ENSMUST00000117163 361 ntBASIC4.26□□□□□ -1.73
Cpsf6Q6NVF9 Gm12261-201ENSMUST00000117499 645 ntBASIC4.26□□□□□ -1.73
Cpsf6Q6NVF9 Gm16128-201ENSMUST00000117855 626 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms