Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Cep290Q6A078 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Gm24475-201ENSMUST00000157435 143 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Gm17162-201ENSMUST00000168538 473 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Mir466m-201ENSMUST00000175052 84 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.5□□□□□ -2.17
Cep290Q6A078 Gm5471-201ENSMUST00000072732 337 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Gm23558-201ENSMUST00000157823 80 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Gm23221-201ENSMUST00000158118 93 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Gm8224-201ENSMUST00000166178 497 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Cep290Q6A078 Gm25633-201ENSMUST00000178565 107 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Gm8219-201ENSMUST00000218309 242 ntBASIC1.5□□□□□ -2.17
Cep290Q6A078 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Cep290Q6A078 Mir343-201ENSMUST00000102360 75 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm21959-201ENSMUST00000178439 452 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm29263-201ENSMUST00000188718 463 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm28384-201ENSMUST00000189079 463 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm42834-201ENSMUST00000196845 256 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm44425-201ENSMUST00000203739 429 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm16976-205ENSMUST00000227324 226 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cep290Q6A078 Mir101a-201ENSMUST00000083517 83 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Mir320-201ENSMUST00000083594 82 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Cep290Q6A078 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm22048-201ENSMUST00000104721 89 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Mir1927-201ENSMUST00000158579 109 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm25248-201ENSMUST00000175473 98 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm19427-201ENSMUST00000183619 208 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm38332-201ENSMUST00000194189 147 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Gm26072-201ENSMUST00000083135 107 ntBASIC1.49□□□□□ -2.17
Cep290Q6A078 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cep290Q6A078 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cep290Q6A078 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Cep290Q6A078 Gm29288-201ENSMUST00000191582 901 ntBASIC1.48□□□□□ -2.17
Cep290Q6A078 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Cep290Q6A078 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Cep290Q6A078 Gm14366-201ENSMUST00000121970 730 ntBASIC1.48□□□□□ -2.17
Cep290Q6A078 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.48□□□□□ -2.17
Cep290Q6A078 Gm23020-201ENSMUST00000158766 253 ntBASIC1.48□□□□□ -2.17
Cep290Q6A078 Gm18953-201ENSMUST00000175694 300 ntBASIC1.48□□□□□ -2.17
Cep290Q6A078 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Cep290Q6A078 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.48□□□□□ -2.17
Cep290Q6A078 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Cep290Q6A078 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Cep290Q6A078 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Cep290Q6A078 Gm14355-201ENSMUST00000117352 264 ntBASIC1.47□□□□□ -2.17
Cep290Q6A078 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Cep290Q6A078 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Cep290Q6A078 Gm26435-201ENSMUST00000179026 107 ntBASIC1.47□□□□□ -2.17
Cep290Q6A078 Gm43431-201ENSMUST00000198577 340 ntBASIC1.47□□□□□ -2.17
Cep290Q6A078 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.47□□□□□ -2.17
Cep290Q6A078 Gm44076-201ENSMUST00000203072 520 ntBASIC1.47□□□□□ -2.17
Cep290Q6A078 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC1.47□□□□□ -2.17
Cep290Q6A078 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Cep290Q6A078 Gm37387-201ENSMUST00000192201 1806 ntBASIC1.47□□□□□ -2.17
Cep290Q6A078 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Cep290Q6A078 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Cep290Q6A078 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Cep290Q6A078 Gm11862-201ENSMUST00000119678 659 ntBASIC1.47□□□□□ -2.17
Cep290Q6A078 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Cep290Q6A078 Mir6540-201ENSMUST00000184886 108 ntBASIC1.47□□□□□ -2.17
Cep290Q6A078 Mir7232-201ENSMUST00000197929 74 ntBASIC1.47□□□□□ -2.17
Cep290Q6A078 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.47□□□□□ -2.17
Cep290Q6A078 Gm14910-201ENSMUST00000121037 1805 ntBASIC1.46□□□□□ -2.17
Cep290Q6A078 Mir5124a-201ENSMUST00000175528 72 ntBASIC1.46□□□□□ -2.18
Cep290Q6A078 Gm29192-201ENSMUST00000190942 377 ntBASIC1.46□□□□□ -2.18
Cep290Q6A078 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.46□□□□□ -2.18
Cep290Q6A078 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.46□□□□□ -2.18
Cep290Q6A078 Gm14927-201ENSMUST00000120283 454 ntBASIC1.46□□□□□ -2.18
Cep290Q6A078 Gm23466-201ENSMUST00000157133 106 ntBASIC1.46□□□□□ -2.18
Cep290Q6A078 Gm25555-201ENSMUST00000158078 111 ntBASIC1.46□□□□□ -2.18
Cep290Q6A078 Gm27921-201ENSMUST00000183968 108 ntBASIC1.46□□□□□ -2.18
Cep290Q6A078 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.46□□□□□ -2.18
Cep290Q6A078 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC1.46□□□□□ -2.18
Cep290Q6A078 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.46□□□□□ -2.18
Cep290Q6A078 AC132260.2-201ENSMUST00000224482 344 ntBASIC1.46□□□□□ -2.18
Cep290Q6A078 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.46□□□□□ -2.18
Cep290Q6A078 Gm24252-201ENSMUST00000083700 132 ntBASIC1.46□□□□□ -2.18
Cep290Q6A078 Gm12782-201ENSMUST00000117519 727 ntBASIC1.45□□□□□ -2.18
Cep290Q6A078 Gm15282-201ENSMUST00000117707 300 ntBASIC1.45□□□□□ -2.18
Cep290Q6A078 Gm43865-201ENSMUST00000204721 127 ntBASIC1.45□□□□□ -2.18
Cep290Q6A078 AC141884.1-201ENSMUST00000226327 636 ntBASIC1.45□□□□□ -2.18
Cep290Q6A078 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.45□□□□□ -2.18
Cep290Q6A078 AC154270.1-201ENSMUST00000227226 426 ntBASIC1.45□□□□□ -2.18
Cep290Q6A078 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Cep290Q6A078 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms