Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm9845-201ENSMUST00000056409 598 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CtcfQ61164 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CtcfQ61164 Gm24043-201ENSMUST00000083108 116 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm25480-201ENSMUST00000083217 133 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm25792-201ENSMUST00000083289 100 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CtcfQ61164 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CtcfQ61164 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CtcfQ61164 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.71□□□□□ -1.82
CtcfQ61164 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.71□□□□□ -1.82
CtcfQ61164 Gm37903-201ENSMUST00000192122 2381 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CtcfQ61164 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CtcfQ61164 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CtcfQ61164 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CtcfQ61164 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
CtcfQ61164 Mir669i-201ENSMUST00000117007 127 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Gm11904-201ENSMUST00000120562 248 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Gm5287-201ENSMUST00000120666 598 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Gm23118-201ENSMUST00000122657 187 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Gm16362-201ENSMUST00000135189 214 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.7□□□□□ -1.82
CtcfQ61164 Gm26746-201ENSMUST00000181722 487 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Gm28030-201ENSMUST00000184987 138 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Gm27588-201ENSMUST00000185096 263 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CtcfQ61164 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.7□□□□□ -1.82
CtcfQ61164 Gm29848-201ENSMUST00000203107 295 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 AC117202.2-201ENSMUST00000226491 1101 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CtcfQ61164 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC3.7□□□□□ -1.82
CtcfQ61164 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Gm25008-201ENSMUST00000083809 81 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Gm23503-201ENSMUST00000083903 107 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Gm10212-201ENSMUST00000087884 324 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CtcfQ61164 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CtcfQ61164 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CtcfQ61164 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CtcfQ61164 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.7□□□□□ -1.82
CtcfQ61164 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CtcfQ61164 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CtcfQ61164 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CtcfQ61164 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm24835-201ENSMUST00000116777 111 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm14469-201ENSMUST00000118363 202 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm15988-201ENSMUST00000118677 367 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm11704-201ENSMUST00000120031 214 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm13356-201ENSMUST00000121678 335 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm14362-201ENSMUST00000121679 273 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm14129-201ENSMUST00000122436 291 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm23867-201ENSMUST00000122649 274 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm15254-201ENSMUST00000149567 273 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm25909-201ENSMUST00000157619 121 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm24853-201ENSMUST00000158026 121 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm25860-201ENSMUST00000158252 126 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm22769-201ENSMUST00000158367 98 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CtcfQ61164 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CtcfQ61164 Gm26988-201ENSMUST00000183296 945 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm27773-201ENSMUST00000184087 78 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Mir6383-201ENSMUST00000184545 116 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm5116-201ENSMUST00000187732 463 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm29627-201ENSMUST00000187984 463 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm8041-201ENSMUST00000199755 616 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm44475-201ENSMUST00000204041 424 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm35876-201ENSMUST00000205044 459 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm29754-201ENSMUST00000206269 358 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm44923-201ENSMUST00000206673 85 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm44611-201ENSMUST00000207507 355 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
CtcfQ61164 Gm45588-201ENSMUST00000211213 630 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm18488-201ENSMUST00000215082 364 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Olfr936-202ENSMUST00000216912 937 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CtcfQ61164 AC116460.1-201ENSMUST00000219040 313 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Gm4036-201ENSMUST00000220842 626 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.69□□□□□ -1.82
CtcfQ61164 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CtcfQ61164 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CtcfQ61164 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CtcfQ61164 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CtcfQ61164 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
CtcfQ61164 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CtcfQ61164 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CtcfQ61164 Gm11859-201ENSMUST00000118099 455 ntBASIC3.68□□□□□ -1.82
CtcfQ61164 Gm11598-201ENSMUST00000119257 357 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms