Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.56□□□□□ -2
Usf1Q61069 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm23648-201ENSMUST00000180301 107 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm25873-201ENSMUST00000180317 107 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm8649-201ENSMUST00000181799 233 ntBASIC2.56□□□□□ -2
Usf1Q61069 Mir6405-201ENSMUST00000184584 124 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm29192-201ENSMUST00000190942 377 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm37281-201ENSMUST00000192412 439 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm37987-201ENSMUST00000194999 825 ntBASIC2.56□□□□□ -2
Usf1Q61069 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Usf1Q61069 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.56□□□□□ -2
Usf1Q61069 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm26379-202ENSMUST00000200225 132 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm45438-201ENSMUST00000210242 564 ntBASIC2.56□□□□□ -2
Usf1Q61069 AL929265.1-201ENSMUST00000213427 125 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm18488-201ENSMUST00000215082 364 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm19540-201ENSMUST00000221843 810 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.56□□□□□ -2
Usf1Q61069 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.56□□□□□ -2
Usf1Q61069 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.56□□□□□ -2
Usf1Q61069 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC2.56□□□□□ -2
Usf1Q61069 Gm22622-201ENSMUST00000082870 129 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm23506-201ENSMUST00000083077 107 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm24610-201ENSMUST00000083270 109 ntBASIC2.56□□□□□ -2
Usf1Q61069 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Usf1Q61069 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm9009-201ENSMUST00000117321 326 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm11356-201ENSMUST00000118974 192 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm11582-201ENSMUST00000121041 236 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm24836-201ENSMUST00000122609 108 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm22026-201ENSMUST00000122735 281 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.55□□□□□ -2
Usf1Q61069 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.55□□□□□ -2
Usf1Q61069 Gm22227-201ENSMUST00000157356 259 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm16289-201ENSMUST00000162079 183 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm3102-201ENSMUST00000164236 489 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm3221-201ENSMUST00000164869 440 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm2855-201ENSMUST00000166765 456 ntBASIC2.55□□□□□ -2
Usf1Q61069 Mir5129-201ENSMUST00000174938 78 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm25642-201ENSMUST00000175137 66 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.55□□□□□ -2
Usf1Q61069 Mir6541-201ENSMUST00000183649 110 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm27700-201ENSMUST00000185003 81 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.55□□□□□ -2
Usf1Q61069 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.55□□□□□ -2
Usf1Q61069 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.55□□□□□ -2
Usf1Q61069 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Usf1Q61069 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.55□□□□□ -2
Usf1Q61069 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.55□□□□□ -2
Usf1Q61069 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Usf1Q61069 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Usf1Q61069 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Usf1Q61069 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.55□□□□□ -2
Usf1Q61069 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.55□□□□□ -2
Usf1Q61069 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.55□□□□□ -2
Usf1Q61069 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Usf1Q61069 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.54□□□□□ -2
Usf1Q61069 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.54□□□□□ -2
Usf1Q61069 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Usf1Q61069 Mir682-201ENSMUST00000102281 96 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm12636-201ENSMUST00000117395 624 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm14751-201ENSMUST00000117693 222 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.54□□□□□ -2
Usf1Q61069 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.54□□□□□ -2
Usf1Q61069 Gm24291-201ENSMUST00000157633 162 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm23777-201ENSMUST00000158994 259 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm16584-201ENSMUST00000159267 189 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.54□□□□□ -2
Usf1Q61069 Spanxn4-201ENSMUST00000172433 424 ntBASIC2.54□□□□□ -2
Usf1Q61069 Mir3075-201ENSMUST00000175340 85 ntBASIC2.54□□□□□ -2
Usf1Q61069 Mir6338-201ENSMUST00000183389 109 ntBASIC2.54□□□□□ -2
Usf1Q61069 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.54□□□□□ -2
Usf1Q61069 Gm37533-201ENSMUST00000193848 545 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm18551-201ENSMUST00000195594 642 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.54□□□□□ -2
Usf1Q61069 Gm18982-201ENSMUST00000198118 529 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm19147-201ENSMUST00000199622 652 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm44125-201ENSMUST00000203068 448 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm44657-201ENSMUST00000208568 450 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm6796-201ENSMUST00000211919 243 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm46146-201ENSMUST00000217483 346 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm46193-201ENSMUST00000219399 364 ntBASIC2.54□□□□□ -2
Usf1Q61069 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.54□□□□□ -2
Usf1Q61069 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.54□□□□□ -2
Usf1Q61069 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.54□□□□□ -2
Usf1Q61069 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.54□□□□□ -2
Usf1Q61069 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm25856-201ENSMUST00000082786 75 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm22578-201ENSMUST00000083730 107 ntBASIC2.54□□□□□ -2
Usf1Q61069 Gm24698-201ENSMUST00000083883 130 ntBASIC2.54□□□□□ -2
Usf1Q61069 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Usf1Q61069 Gm16261-201ENSMUST00000096813 205 ntBASIC2.54□□□□□ -2
Usf1Q61069 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.54□□□□□ -2
Usf1Q61069 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Usf1Q61069 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.54□□□□□ -2
Usf1Q61069 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms