Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Synpr-207ENSMUST00000223583 3362 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm23273-201ENSMUST00000104058 135 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm15029-201ENSMUST00000119742 199 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm6565-201ENSMUST00000121217 438 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm22613-201ENSMUST00000122679 292 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm17187-201ENSMUST00000164622 410 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Mup-ps11-201ENSMUST00000178040 545 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Mup-ps3-201ENSMUST00000178315 545 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Mir3620-201ENSMUST00000184710 61 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm30280-201ENSMUST00000192214 262 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm42925-201ENSMUST00000197359 285 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm18306-201ENSMUST00000207338 569 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm45499-201ENSMUST00000211656 280 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm9616-201ENSMUST00000221154 781 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm46389-201ENSMUST00000223199 392 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm6361-201ENSMUST00000091031 435 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Gm650-201ENSMUST00000144428 1551 ntBASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Scaf1Q5U4C3 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 n-R5s52-201ENSMUST00000104614 113 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm15526-201ENSMUST00000112504 204 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm15151-201ENSMUST00000117106 177 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm12719-201ENSMUST00000118859 241 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm15213-201ENSMUST00000122098 216 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm22211-201ENSMUST00000158097 156 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm23921-201ENSMUST00000175258 107 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm27254-201ENSMUST00000183926 517 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm27997-201ENSMUST00000184942 69 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm37558-201ENSMUST00000193684 2983 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm44844-201ENSMUST00000207242 336 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 AC126267.1-201ENSMUST00000214282 284 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 AC154241.1-201ENSMUST00000223952 356 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 AC151833.1-201ENSMUST00000227752 574 ntBASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf1Q5U4C3 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
Scaf1Q5U4C3 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Scaf1Q5U4C3 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm3370-201ENSMUST00000171785 500 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm19898-201ENSMUST00000177490 251 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm27747-201ENSMUST00000184707 85 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm25203-202ENSMUST00000200458 216 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm44157-201ENSMUST00000204720 410 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm45392-201ENSMUST00000210441 214 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm23928-201ENSMUST00000082469 145 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm25203-201ENSMUST00000082842 215 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 n-R5s3-201ENSMUST00000083879 112 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm8074-201ENSMUST00000095071 252 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm44049-201ENSMUST00000204905 2984 ntBASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf1Q5U4C3 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Gm25316-201ENSMUST00000116826 118 ntBASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Gm12982-201ENSMUST00000117408 190 ntBASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Gm14916-201ENSMUST00000121904 204 ntBASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Gm24909-201ENSMUST00000157290 280 ntBASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC6.07□□□□□ -1.44
Scaf1Q5U4C3 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms