Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm8816-201ENSMUST00000182280 1163 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm27979-201ENSMUST00000185126 56 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Mir6376-201ENSMUST00000185149 131 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm34701-202ENSMUST00000204685 360 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 AC145736.1-201ENSMUST00000214661 479 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 AC154262.1-201ENSMUST00000225976 286 ntBASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Trav3-1Q5R1I8 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm36944-201ENSMUST00000192257 2759 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l9-201ENSMUST00000101891 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm26504-201ENSMUST00000102033 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm11881-201ENSMUST00000119408 572 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 n-R5s192-201ENSMUST00000122577 119 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm22755-201ENSMUST00000157143 100 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm25625-201ENSMUST00000157221 96 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm24553-201ENSMUST00000158653 131 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm26502-201ENSMUST00000177732 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l13-201ENSMUST00000177737 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm25350-201ENSMUST00000177849 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l15-201ENSMUST00000177940 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm23446-201ENSMUST00000177977 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l4-201ENSMUST00000177982 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm26201-201ENSMUST00000178047 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm24711-201ENSMUST00000178062 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm24609-201ENSMUST00000178166 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm23265-201ENSMUST00000178321 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm22812-201ENSMUST00000178329 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l3-201ENSMUST00000178370 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm26246-201ENSMUST00000178388 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm25155-201ENSMUST00000178450 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm24760-201ENSMUST00000178530 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm22285-201ENSMUST00000178576 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm22417-201ENSMUST00000178656 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l2-201ENSMUST00000178675 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm26270-201ENSMUST00000178690 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l16-201ENSMUST00000178777 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm23313-201ENSMUST00000178931 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l17-201ENSMUST00000178936 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm23089-201ENSMUST00000178947 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l10-201ENSMUST00000179053 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm24153-201ENSMUST00000179280 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm25597-201ENSMUST00000179388 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l1-201ENSMUST00000179518 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm25816-201ENSMUST00000179764 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l8-201ENSMUST00000179889 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l7-201ENSMUST00000179895 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l5-201ENSMUST00000179927 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l6-201ENSMUST00000179955 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm26188-201ENSMUST00000179963 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm26433-201ENSMUST00000180227 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Snord116l11-201ENSMUST00000180312 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm22128-201ENSMUST00000180346 94 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Mir7013-201ENSMUST00000183540 72 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm27355-201ENSMUST00000185045 128 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm19030-201ENSMUST00000194947 552 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm19252-201ENSMUST00000204705 305 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 AL590503.1-201ENSMUST00000222053 321 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm22622-201ENSMUST00000082870 129 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm44049-201ENSMUST00000204905 2984 ntBASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Trav3-1Q5R1I8 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm12191-201ENSMUST00000118307 348 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm15497-201ENSMUST00000119137 551 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm26101-201ENSMUST00000157246 105 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm24262-201ENSMUST00000157431 144 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Snord13-201ENSMUST00000157627 104 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm8161-201ENSMUST00000168739 481 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm25817-201ENSMUST00000177758 121 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm23933-201ENSMUST00000178405 79 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm22862-201ENSMUST00000178593 121 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm24766-201ENSMUST00000179182 121 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Mir6921-201ENSMUST00000183719 80 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm27599-201ENSMUST00000183758 174 ntBASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-1Q5R1I8 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms