Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav5d-4Q5R1F6 Gm38071-201ENSMUST00000195792 3378 ntBASIC1.88□□□□□ -2.11
Trav5d-4Q5R1F6 Gm42659-201ENSMUST00000196955 1754 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 AC169038.1-201ENSMUST00000227378 1352 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm26015-201ENSMUST00000104402 125 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Mir1195-201ENSMUST00000116818 98 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm6954-201ENSMUST00000117416 225 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm9432-201ENSMUST00000117810 759 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm12513-201ENSMUST00000118617 352 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm5287-201ENSMUST00000120666 598 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm14411-201ENSMUST00000121798 914 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm16510-201ENSMUST00000153501 249 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm25391-201ENSMUST00000157342 134 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm27599-201ENSMUST00000183758 174 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm8392-201ENSMUST00000185647 835 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm37081-201ENSMUST00000192034 196 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm19694-201ENSMUST00000192364 505 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Trbv6-201ENSMUST00000193743 276 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm37037-201ENSMUST00000194475 424 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm37063-201ENSMUST00000194678 3520 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm46146-201ENSMUST00000217483 346 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 n-R5s196-201ENSMUST00000083136 117 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm25792-201ENSMUST00000083289 100 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Mir137-201ENSMUST00000083635 73 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Mir127-201ENSMUST00000093568 70 ntBASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trav5d-4Q5R1F6 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm43540-201ENSMUST00000196320 3848 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm25376-201ENSMUST00000104340 133 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm14848-201ENSMUST00000121850 467 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm24552-201ENSMUST00000158646 103 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm22093-201ENSMUST00000158980 111 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm15900-201ENSMUST00000161584 342 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm37213-201ENSMUST00000193077 586 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm19118-201ENSMUST00000222554 98 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm2544-201ENSMUST00000222702 756 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 AC121960.3-201ENSMUST00000227077 623 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 AC126440.1-201ENSMUST00000227098 349 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gm25796-201ENSMUST00000082645 163 ntBASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Trav5d-4Q5R1F6 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm13359-201ENSMUST00000119000 695 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm24002-201ENSMUST00000158456 104 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm17063-201ENSMUST00000168135 456 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Mir3112-201ENSMUST00000175431 82 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm13147-202ENSMUST00000177526 1173 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm27522-201ENSMUST00000183949 230 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm29184-201ENSMUST00000190038 334 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm37557-201ENSMUST00000191640 139 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm18985-201ENSMUST00000196472 1079 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm44295-201ENSMUST00000203805 437 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm44720-201ENSMUST00000206076 260 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm45173-201ENSMUST00000206819 305 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm17850-201ENSMUST00000210023 1154 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm18026-201ENSMUST00000222789 727 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm22866-201ENSMUST00000083947 177 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.85□□□□□ -2.11
Trav5d-4Q5R1F6 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm14677-201ENSMUST00000117866 486 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav5d-4Q5R1F6 Gm22554-201ENSMUST00000157798 147 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms