Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Mir466p-201ENSMUST00000103925 89 ntBASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Gm26028-201ENSMUST00000158660 294 ntBASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Gm25999-201ENSMUST00000175398 133 ntBASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Mir7578-201ENSMUST00000183455 82 ntBASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Gm42428-201ENSMUST00000198677 302 ntBASIC8.13□□□□□ -1.11
Trim41Q5NCC3 AC155923.1-201ENSMUST00000215676 356 ntBASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 AC165293.1-201ENSMUST00000219669 329 ntBASIC8.13□□□□□ -1.11
Trim41Q5NCC3 AC174459.2-201ENSMUST00000226036 160 ntBASIC8.13□□□□□ -1.11
Trim41Q5NCC3 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Mir32-201ENSMUST00000083610 70 ntBASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Gm44821-201ENSMUST00000208212 2002 ntBASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim41Q5NCC3 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim41Q5NCC3 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim41Q5NCC3 Gm23782-201ENSMUST00000157939 120 ntBASIC8.12□□□□□ -1.11
Trim41Q5NCC3 Gm44520-201ENSMUST00000205447 802 ntBASIC8.12□□□□□ -1.11
Trim41Q5NCC3 Gm8319-201ENSMUST00000205708 641 ntBASIC8.12□□□□□ -1.11
Trim41Q5NCC3 Gm44844-201ENSMUST00000207242 336 ntBASIC8.12□□□□□ -1.11
Trim41Q5NCC3 Gm30674-201ENSMUST00000214523 392 ntBASIC8.12□□□□□ -1.11
Trim41Q5NCC3 Gm22685-201ENSMUST00000082848 106 ntBASIC8.12□□□□□ -1.11
Trim41Q5NCC3 n-R5s50-201ENSMUST00000083168 111 ntBASIC8.12□□□□□ -1.11
Trim41Q5NCC3 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim41Q5NCC3 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim41Q5NCC3 AC112274.1-201ENSMUST00000218957 4274 ntBASIC8.12□□□□□ -1.11
Trim41Q5NCC3 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Gm13714-201ENSMUST00000117313 221 ntBASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Gm22606-201ENSMUST00000158290 103 ntBASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Gm25716-201ENSMUST00000158628 104 ntBASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Gm23816-201ENSMUST00000179617 132 ntBASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Gm27233-201ENSMUST00000184030 307 ntBASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Gm27608-201ENSMUST00000184822 162 ntBASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Gm3338-201ENSMUST00000220982 269 ntBASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Mir10a-201ENSMUST00000083585 110 ntBASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim41Q5NCC3 AC113059.3-201ENSMUST00000217423 2777 ntBASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Trim41Q5NCC3 AC153532.2-201ENSMUST00000219753 3844 ntBASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Trim41Q5NCC3 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Trim41Q5NCC3 n-R5s192-201ENSMUST00000122577 119 ntBASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Gm25054-201ENSMUST00000157370 97 ntBASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Gm21960-201ENSMUST00000181924 452 ntBASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Gm28471-201ENSMUST00000185994 615 ntBASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Gm29022-201ENSMUST00000190702 225 ntBASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Gm43828-201ENSMUST00000196890 639 ntBASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Gm45513-201ENSMUST00000210228 376 ntBASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Gm45033-201ENSMUST00000206710 3167 ntBASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Gm37983-201ENSMUST00000193207 2006 ntBASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim41Q5NCC3 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim41Q5NCC3 Mir292-201ENSMUST00000104847 82 ntBASIC8.09□□□□□ -1.11
Trim41Q5NCC3 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC8.09□□□□□ -1.11
Trim41Q5NCC3 Gm20450-201ENSMUST00000173652 147 ntBASIC8.09□□□□□ -1.11
Trim41Q5NCC3 Gm25615-201ENSMUST00000177836 94 ntBASIC8.09□□□□□ -1.11
Trim41Q5NCC3 Mir6393-201ENSMUST00000183709 94 ntBASIC8.09□□□□□ -1.11
Trim41Q5NCC3 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC8.09□□□□□ -1.11
Trim41Q5NCC3 Vaultrc5-201ENSMUST00000083211 143 ntBASIC8.09□□□□□ -1.11
Trim41Q5NCC3 Mir338-201ENSMUST00000083666 98 ntBASIC8.09□□□□□ -1.11
Trim41Q5NCC3 Gm36989-201ENSMUST00000193225 2160 ntBASIC8.09□□□□□ -1.11
Trim41Q5NCC3 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim41Q5NCC3 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Gm23709-201ENSMUST00000104364 130 ntBASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Gm22536-201ENSMUST00000158171 134 ntBASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Gm20651-201ENSMUST00000177219 329 ntBASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Gm27883-201ENSMUST00000183941 102 ntBASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Mir6540-201ENSMUST00000184886 108 ntBASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Gm5548-201ENSMUST00000055878 397 ntBASIC8.08□□□□□ -1.12
Trim41Q5NCC3 Mir26a-2-201ENSMUST00000083496 84 ntBASIC8.08□□□□□ -1.12
Trim41Q5NCC3 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms