Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm22486-201ENSMUST00000116815 137 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm11219-201ENSMUST00000118565 358 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm12443-201ENSMUST00000122308 323 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm23463-201ENSMUST00000122468 99 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm20660-201ENSMUST00000177515 289 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.69□□□□□ -1.98
Usp28Q5I043 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm21894-201ENSMUST00000179631 546 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm17929-201ENSMUST00000186851 627 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Usp28Q5I043 Mir3069-201ENSMUST00000198802 65 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.69□□□□□ -1.98
Usp28Q5I043 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 CT009550.5-201ENSMUST00000226286 382 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm22249-201ENSMUST00000082485 136 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.69□□□□□ -1.98
Usp28Q5I043 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Usp28Q5I043 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Usp28Q5I043 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Usp28Q5I043 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Usp28Q5I043 Mir883a-201ENSMUST00000104824 76 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Mir1192-201ENSMUST00000116976 121 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm13756-201ENSMUST00000117618 222 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm15282-201ENSMUST00000117707 300 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm15231-201ENSMUST00000119174 447 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm7209-201ENSMUST00000122339 333 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm25910-201ENSMUST00000157620 140 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm22947-201ENSMUST00000158559 91 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm26215-201ENSMUST00000158584 139 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Usp28Q5I043 Mir7013-201ENSMUST00000183540 72 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm27379-201ENSMUST00000183730 123 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm29335-201ENSMUST00000188361 459 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Usp28Q5I043 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Usp28Q5I043 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm5471-201ENSMUST00000072732 337 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm22806-201ENSMUST00000082738 136 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm24707-201ENSMUST00000082812 107 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm22265-201ENSMUST00000082947 116 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Gm26128-201ENSMUST00000083170 110 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.68□□□□□ -1.98
Usp28Q5I043 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Usp28Q5I043 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Usp28Q5I043 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Mir878-201ENSMUST00000104680 78 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm13454-201ENSMUST00000118166 483 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm23887-201ENSMUST00000122683 172 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm26280-201ENSMUST00000157096 101 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm25153-201ENSMUST00000157118 156 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm24962-201ENSMUST00000157917 109 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm24958-201ENSMUST00000158009 97 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm26271-201ENSMUST00000158349 104 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm26406-201ENSMUST00000158503 124 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Mir3965-201ENSMUST00000175570 69 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.67□□□□□ -1.98
Usp28Q5I043 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm27999-201ENSMUST00000183539 193 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm18448-201ENSMUST00000186286 599 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm19224-201ENSMUST00000190477 793 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm43489-201ENSMUST00000196810 993 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Usp28Q5I043 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm44223-201ENSMUST00000204854 114 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm44399-201ENSMUST00000205043 226 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm45452-201ENSMUST00000210905 177 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.67□□□□□ -1.98
Usp28Q5I043 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm24313-201ENSMUST00000082561 133 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Mir16-2-201ENSMUST00000083672 95 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Usp28Q5I043 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms