Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm7582-201ENSMUST00000160831 603 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm20450-201ENSMUST00000173652 147 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm26061-201ENSMUST00000175584 108 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm24306-201ENSMUST00000180229 79 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm28069-201ENSMUST00000189926 214 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm1833-201ENSMUST00000191608 682 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm17966-201ENSMUST00000193453 594 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm37845-201ENSMUST00000194977 355 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim40Q3UWA4 AL772265.1-201ENSMUST00000214379 305 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm25586-201ENSMUST00000082499 112 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Mir21a-201ENSMUST00000083521 92 ntBASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.85□□□□□ -1.95
Trim40Q3UWA4 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm43881-201ENSMUST00000203051 2530 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Snord14c-201ENSMUST00000101927 86 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm22957-201ENSMUST00000122511 123 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm22793-201ENSMUST00000157227 330 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm24315-201ENSMUST00000177835 127 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Mir496b-201ENSMUST00000184935 113 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm28163-201ENSMUST00000187099 325 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Scgb2b6-201ENSMUST00000188132 330 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm18551-201ENSMUST00000195594 642 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm44157-201ENSMUST00000204720 410 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm45245-201ENSMUST00000210082 376 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm45438-201ENSMUST00000210242 564 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm21007-201ENSMUST00000221024 326 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
Trim40Q3UWA4 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
Trim40Q3UWA4 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.84□□□□□ -1.96
Trim40Q3UWA4 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Trim40Q3UWA4 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm24119-201ENSMUST00000103979 246 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm13076-201ENSMUST00000118041 204 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm11784-201ENSMUST00000118568 474 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm14694-201ENSMUST00000121856 282 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm22320-201ENSMUST00000157149 312 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm22225-201ENSMUST00000157358 278 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm25572-201ENSMUST00000157527 172 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Mir1934-201ENSMUST00000158127 83 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm23022-201ENSMUST00000158768 180 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Mir5710-201ENSMUST00000176884 69 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm21726-201ENSMUST00000179654 392 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Mir6405-201ENSMUST00000184584 124 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm29658-201ENSMUST00000185404 230 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm42475-201ENSMUST00000201212 295 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm45080-201ENSMUST00000206648 283 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.83□□□□□ -1.96
Trim40Q3UWA4 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm25755-201ENSMUST00000083396 107 ntBASIC2.83□□□□□ -1.96
Trim40Q3UWA4 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trim40Q3UWA4 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim40Q3UWA4 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm14622-201ENSMUST00000117117 468 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm12370-201ENSMUST00000117809 604 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm12156-201ENSMUST00000119188 554 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm26099-201ENSMUST00000157248 109 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm22597-201ENSMUST00000157602 80 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm25667-201ENSMUST00000157701 275 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm22789-201ENSMUST00000157884 130 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Mir5129-201ENSMUST00000174938 78 ntBASIC2.82□□□□□ -1.96
Trim40Q3UWA4 Gm25470-201ENSMUST00000175576 111 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms